Pairwise Alignments

Query, 750 a.a., Penicillin-binding protein 1A (NCBI) from Rhodospirillum rubrum S1H

Subject, 774 a.a., penicillin-binding protein from Pseudomonas simiae WCS417

 Score =  266 bits (680), Expect = 3e-75
 Identities = 183/540 (33%), Positives = 284/540 (52%), Gaps = 34/540 (6%)

Query: 96  VALAEMPASLVNAVIAFEDRRFRDHWGVDPRGIARAIWVNLRSGGRTQGASTLTQQLVKN 155
           + L ++P  L+  ++A EDR F  HWGV P+ IARA+WVN   G  TQG STLTQQLVKN
Sbjct: 171 IKLDQVPPYLLETLVAVEDRDFYHHWGVSPKSIARAVWVNTSGGKMTQGGSTLTQQLVKN 230

Query: 156 TLLTPEKTFTRKIQEAMLALWIERKLTKDEILERYLNSLYLGAGS----YGVDAAARRYF 211
             LT E++ TRK+ EAM+A+ +E   +K EILE YLN +++G       +G   A++ +F
Sbjct: 231 FYLTNERSLTRKLTEAMMAMLLELHYSKQEILEAYLNEVFVGQDGQRAVHGFGLASQFFF 290

Query: 212 NKPVTDLSLAESAMIAGLIQAPARTGPTTALDVARQRAELVLDVMRDQGLIGADEATWAK 271
            +P+++L L + A++ G+++ P+   P    + A +R  LVLDV+  QG+  A++   AK
Sbjct: 291 GQPLSELKLHQVALLVGMVKGPSYYNPRRNPERALERRNLVLDVLEQQGVATAEQVAAAK 350

Query: 272 AHPASLAV-PPVELPAYGAVSDWIADEARKAL--GPLSGDFL-VVSTLDRRLQVLAQQTI 327
             P  +     +   ++    D +  + R+      L+ + L + ++ D  LQ+ A+ ++
Sbjct: 351 KMPLGVTTRGKLADSSFPGFIDLVKRQLREDYRDEDLTEEGLRIFTSFDPILQMKAEASV 410

Query: 328 QEGM--AAEGAGLRATQAALVAMAPD-GRVLAMVGGRDYQESQFNRAVQARRQPGSIFKL 384
            +         G    +AA+V   P+ G V AM+G R    + FNRA+ A R  GS+ K 
Sbjct: 411 NDTFKRLTGRKGSDEVEAAMVVTNPETGEVQAMIGSRQASFAGFNRALDAVRPIGSLVKP 470

Query: 385 FVYLTALS-------NNWRPDDPIDDTPLTIDGWSPENYGGGAGHGSVPLRVAFAHSYNL 437
            VYLTAL         +W  DDP+         W+P+N+     HG+V L    AHSYN+
Sbjct: 471 AVYLTALEKPSKYTLTSWLSDDPLSVKGGDGQVWTPQNF-DRRSHGTVFLYQGIAHSYNI 529

Query: 438 AAVRLQEAVGREAVIATARSMGLKDDLQPLPSLALGTFPATLLDLTSAFAAVAADRATVQ 497
           +  RL   VG   V+ T   +G+  +    PS+ LG    T +++ + +  +A       
Sbjct: 530 STSRLGLEVGVPNVLKTIARLGVTREFPAFPSILLGAGAMTPMEVATMYQTLANGGFNTP 589

Query: 498 PRVI-EVLRTPGSGEIRPPVRQSGRAPWPRASALDLLNA---VVTQGTGRAAALGVPT-- 551
            R I  VL   G    R P +   R  +   S   + NA   V+ +GTGR+    +P   
Sbjct: 590 MRGIRSVLTAEGEPLKRYPFQIQQR--FDAGSIYLIQNAMQRVMREGTGRSVYSVLPANL 647

Query: 552 --YGKTGTTQDNRDAWFIGFAGNLVIGVWVGNDD--ETPMTGISGGGLPAKLWQSFAARA 607
              GKTGT+ D+RD+WF GF  +++  VW+G DD  +TP TG +G     ++W SF  +A
Sbjct: 648 TLAGKTGTSNDSRDSWFAGFGQDVLAVVWLGRDDNGKTPFTGATGA---LQVWTSFMRKA 704