Pairwise Alignments

Query, 750 a.a., Penicillin-binding protein 1A (NCBI) from Rhodospirillum rubrum S1H

Subject, 817 a.a., penicillin-insensitive transglycosylase/penicillin-sensitive transpeptidase from Pseudomonas putida KT2440

 Score =  169 bits (427), Expect = 7e-46
 Identities = 114/315 (36%), Positives = 175/315 (55%), Gaps = 22/315 (6%)

Query: 46  VLALGVLVLAINLYTMPLSPSFQEPERSGFL-------IADAEGTVVATRGVTAGRPVAL 98
           V  +  LVL ++   + LSPS    E    +       +  ++G ++A  G     P+  
Sbjct: 13  VAVICALVLGVSGAFLYLSPSLPSVESLRSIQLQIPLRVYSSDGKLIAEFGEMRRSPIRF 72

Query: 99  AEMPASLVNAVIAFEDRRFRDHWGVDPRGIARAIWVNLRSGGRTQGASTLTQQLVKNTLL 158
           AE+P   + A+++ ED  F +H+GVDP  + RA    +++G    G ST+T Q+ KN  L
Sbjct: 73  AEIPPQFIQALLSAEDDNFLNHYGVDPSSLMRAATQLVKTGHIQTGGSTITMQVAKNFFL 132

Query: 159 TPEKTFTRKIQEAMLALWIERKLTKDEILERYLNSLYLGAGSYGVDAAARRYFNKPVTDL 218
           T E++F+RK  E +LAL IER+LTKDEILE Y+N +YLG  +YG+DAAA+ Y+ K + D+
Sbjct: 133 TSERSFSRKTNEILLALQIERELTKDEILELYVNKIYLGNRAYGIDAAAQVYYGKSIRDV 192

Query: 219 SLAESAMIAGLIQAPARTGPTTALDVARQRAELVLDVMRDQGLI--GADEATWAKAHPAS 276
           SLA+ AMIAGL +AP+R  P      A++R + +L  M   G I   + EA  A+   AS
Sbjct: 193 SLAQMAMIAGLPKAPSRFNPLANPVRAKERRDWILGRMYKLGKIDQASYEAALAEPLNAS 252

Query: 277 LAVPPVELPAYGAVSDWIADEAR-KALGPLSGD-----FLVVSTLDRRLQVLAQQTIQEG 330
             VP  E+ A      +IA+ AR + +G    D     F V +T+   +Q +A + + +G
Sbjct: 253 YHVPTPEVNA-----PYIAEMARAEMVGRYGSDAYTEGFRVTTTVPSDMQEMANKAVLKG 307

Query: 331 MA--AEGAGLRATQA 343
           ++   E  G R  +A
Sbjct: 308 LSDYDERHGYRGPEA 322



 Score =  127 bits (319), Expect = 2e-33
 Identities = 114/358 (31%), Positives = 165/358 (46%), Gaps = 65/358 (18%)

Query: 342 QAALVAMAPD-GRVLAMVGGRDYQESQFNRAVQARRQPGSIFKLFVYLTALSNNWRPDDP 400
           Q+ALV + P+ G + A+VGG  +++S +NRAVQA+RQPGS FK F+Y  AL + +     
Sbjct: 423 QSALVTLDPNNGAIRALVGGFSFEQSNYNRAVQAKRQPGSSFKPFIYSAALDSGYTASSL 482

Query: 401 IDDTPL-----TIDG-WSPENYGGGAGHGSVPLRVAFAHSYNLAAVRLQEAVGREAVIAT 454
           ++D P+     ++D  W P+N       G + +R A   S NL ++RL +A+G +  I  
Sbjct: 483 VNDAPIVFVDESVDKVWRPKN-DTNTFLGPIRMREALYKSRNLVSIRLLQAMGVDRTIDY 541

Query: 455 ARSMGL-KDDLQPLPSLALGTFPATLLDLTSAFAAVAADRATVQPRVIEVLRTPGSGE-- 511
               G  K DL    SLALGT   T +++ + ++  A     + P +IE + +  SGE  
Sbjct: 542 IAKFGFNKQDLPRNLSLALGTATLTPMEIATGWSTFANGGYKITPYLIERIES-RSGETL 600

Query: 512 -----IRPP-------------------------------VRQSGRAPWPRASALD---- 531
                 R P                               V  + +AP      +D    
Sbjct: 601 FTANPARVPQGAQDQAGLAAPEQPISTAAMPGEAPSAFSQVAAASQAPAVAEQIIDGRTT 660

Query: 532 -----LLNAVVTQGTG-RAAALG-VPTYGKTGTTQDNRDAWFIGFAGNLVIGVWVGNDD- 583
                +L  V+ +GTG RA ALG     GKTGTT +++DAWF G+  + V  VWVG D  
Sbjct: 661 YILTSMLQDVIKRGTGRRALALGRTDLAGKTGTTNESKDAWFSGYNADYVTTVWVGFDQP 720

Query: 584 ETPMTGISGGGLPAKLWQSFAARALAGGVAGSAPAAPIAAATTATLP----AAAPPAP 637
           ET      GG     +W +F   AL    A  APA P    +    P    AA+P  P
Sbjct: 721 ETLGRREYGGTAALPIWMNFMGAALKDKPA-HAPAEPEGILSLRVDPVSGRAASPSTP 777