Pairwise Alignments

Query, 750 a.a., Penicillin-binding protein 1A (NCBI) from Rhodospirillum rubrum S1H

Subject, 773 a.a., transglycosylase/transpeptidase from Pseudomonas putida KT2440

 Score =  249 bits (635), Expect = 5e-70
 Identities = 176/539 (32%), Positives = 276/539 (51%), Gaps = 32/539 (5%)

Query: 96  VALAEMPASLVNAVIAFEDRRFRDHWGVDPRGIARAIWVNLRSGGRTQGASTLTQQLVKN 155
           + + ++P  L+  ++A EDR F  H+GV P+ I RA+WVN  SG   QG STLTQQLVKN
Sbjct: 171 IKIDQVPKYLLETLVATEDREFYSHFGVSPKSIVRAMWVNTSSGSMRQGGSTLTQQLVKN 230

Query: 156 TLLTPEKTFTRKIQEAMLALWIERKLTKDEILERYLNSLYLGAGS----YGVDAAARRYF 211
             L+ E++ +RK+ EAM+A+ +E    K EILE YLN +++G       +G   A++ +F
Sbjct: 231 FYLSSERSLSRKLTEAMMAVLLELHYDKREILEAYLNEVFVGQDGQRAVHGFGLASQFFF 290

Query: 212 NKPVTDLSLAESAMIAGLIQAPARTGPTTALDVARQRAELVLDVMRDQGLIGADEATWAK 271
           ++P+++L L + A++ G+++ P+   P    + A  R  LVLD++ +QG+    E   AK
Sbjct: 291 SQPLSELKLHQIALLVGMVKGPSYYNPRRHPERALARRNLVLDLVAEQGVASQAEVDAAK 350

Query: 272 AHPASL----AVPPVELPAY-GAVSDWIADEARKALGPLSGDFLVVSTLDRRLQVLAQQT 326
             P  +    ++     PA+   V   +  + R       G   + ++ D  LQ+ A+ +
Sbjct: 351 KMPLGVTKRGSLADSSFPAFLDLVKRQLRQDYRDEDLTEEG-LRIFTSFDPILQMKAETS 409

Query: 327 IQEGM--AAEGAGLRATQAALVAMAPD-GRVLAMVGGRDYQESQFNRAVQARRQPGSIFK 383
           + E     A   G    +AA+V   P+ G V A++G R    + FNRA+ A R  GS+ K
Sbjct: 410 MSETFKRLAGRKGADDVEAAMVVTNPETGEVQALIGSRQAGFAGFNRAIDAVRPIGSLVK 469

Query: 384 LFVYLTALS-------NNWRPDDPIDDTPLTIDGWSPENYGGGAGHGSVPLRVAFAHSYN 436
             VYLTAL         +W  D+P          W P+NY     HG++ L    A+SYN
Sbjct: 470 PSVYLTALEQPSKYTLTSWVQDEPFSVKGADGQVWRPQNY-DRRPHGTIYLYQGLANSYN 528

Query: 437 LAAVRLQEAVGREAVIATARSMGLKDDLQPLPSLALGTFPATLLDLTSAFAAVAADRATV 496
           L+  +L   VG   VI T   +G+  D    P++ LG    + + + + +  +A      
Sbjct: 529 LSTAKLGLEVGVPNVIKTIGRLGVNVDWPAFPAMLLGAGGMSPMQVATMYQTIANGGFNT 588

Query: 497 QPRVI-EVLRTPGSGEIRPPVR-QSGRAPWPRASALDLLNAVVTQGTGRAAALGVP---- 550
             R I  VL   G    R P + Q    P       + +  V+ +GTGR+    +P    
Sbjct: 589 PMRGIRSVLTAEGEPLKRYPFQIQQTFDPGAIYLVQNAMQRVMREGTGRSVYNTLPRSLT 648

Query: 551 TYGKTGTTQDNRDAWFIGFAGNLVIGVWVGNDD--ETPMTGISGGGLPAKLWQSFAARA 607
             GKTGT+ D+RD+WF GF+ +L+  VW+G DD  +TP TG +G     ++W SF  +A
Sbjct: 649 LAGKTGTSNDSRDSWFSGFSQDLLAVVWMGRDDNGKTPFTGATGA---LQVWTSFMKKA 704