Pairwise Alignments

Query, 373 a.a., extracellular solute-binding protein, family 3 (NCBI) from Rhodospirillum rubrum S1H

Subject, 312 a.a., ABC transporter, substrate binding protein (amino acid) from Agrobacterium fabrum C58

 Score =  248 bits (633), Expect = 2e-70
 Identities = 132/320 (41%), Positives = 190/320 (59%), Gaps = 16/320 (5%)

Query: 62  IRDRGSVTCGTNP-IPGFGFPDSDGNWRGFFIDFCRALAAATLGDPTAFEVVPVESNSRW 120
           ++ +G VTCG +  IPGF  PD  G W G  +D+CR +A A  GDP+  + V + S  R+
Sbjct: 1   MKGKGFVTCGVSAGIPGFSNPDDKGEWSGIDVDYCRGIATAVFGDPSKAKFVALSSKDRF 60

Query: 121 EALNSHTTDVNVDGSTWTLSRDTALGFDFPGVLIYDGQRFLAKPSVPEGSVKAAAGLRVC 180
            AL S   DV    +TWT+SRDT+LGF+F  V  YDGQ F+AK  +   S    +G  VC
Sbjct: 61  PALQSGEVDVLTRNTTWTISRDTSLGFNFRTVNYYDGQGFIAKKGLNVKSALELSGAAVC 120

Query: 181 IIMGTTAEVNLRDFLKKNDLEMTVIATESDEGAWTSFLKGRCELFVNDGIGL-ALRNALH 239
           +  GTT E+NL D+ K N+L+   +  E +  A +++  GRC+++  D  GL A+R  L 
Sbjct: 121 VQTGTTTELNLADYFKTNNLQYNPVVFEKESDATSAYDSGRCDVYTTDQSGLYAIR--LK 178

Query: 240 MTPPRVNHLMTEAISKEPLGPVVRGDDHQWLEINRWVLNVLIAAEEAGISSTTLVDPSPT 299
           +  P  N ++ E ISKEPLGP VR  D QW +I  WV   ++ AEE GI+S  + +   +
Sbjct: 179 LKNPDDNIVLPEVISKEPLGPAVRQGDDQWFDIVTWVHYAMVNAEELGITSKNVDEQKTS 238

Query: 300 AD------LSSEDRVFVGGPEDNAAALGLEPGWARRVIAAVGNYGEVFDRNLGKGSEIGL 353
           A+      L +E+   +G        LG+   WA  ++  VGNYGEVFDRN+G GS + +
Sbjct: 239 ANPDVKRLLGTEEGTKIG------TDLGVGNDWAYNIVKLVGNYGEVFDRNVGAGSPLKI 292

Query: 354 DRGVNALWSEGGLMISPPLQ 373
           +RG NALW++GGL  +PP++
Sbjct: 293 ERGQNALWTKGGLQYAPPVR 312