Pairwise Alignments

Query, 686 a.a., Putative diguanylate cyclase (GGDEF domain) (NCBI) from Rhodospirillum rubrum S1H

Subject, 1098 a.a., PAS/PAC/GAF sensor-containing diguanylate cyclase/phosphodiesterase from Pseudomonas putida KT2440

 Score =  124 bits (312), Expect = 2e-32
 Identities = 90/307 (29%), Positives = 151/307 (49%), Gaps = 16/307 (5%)

Query: 375 REIGERRIVESHLRQSETRYRMMIEAAPFGVLISSLSTDHIVQIN-----ARAEDQLQAM 429
           R+I +++  E+ L+ SE ++     ++P  + I+   +   +++N            + +
Sbjct: 520 RDITQQQRAEAALKSSEEKFAKAFHSSPDAITITERHSGRYLEVNDGFCRLTGYSTDEVI 579

Query: 430 RHWVIDKPFADLFVDPADHRRLLDTLNKTGSIANFVALLRTATDNDFWAELSAAVIDLDR 489
            H V +     ++ D      LL  L + G + +   L R    +    E+S   I L+ 
Sbjct: 580 GHTVYE---IGIWADDKQRSALLAELRERGRVHHREMLGRNKRGDILTVEVSVEPITLNE 636

Query: 490 SPAVFASFNDISQTKALERELRALAERDSLTGLANRLRVMDALRSEFDRVTRYGGALSVM 549
              +  +  D+SQ K  + ++R LA  D LT L NR  +MD L  +   + R+    +++
Sbjct: 637 VDCLLLTARDVSQLKNAQAQIRHLAYHDPLTNLPNRALLMDRLSQQIALLKRHNLRGALL 696

Query: 550 MLDLDRFKVLNDRHGHVCGDEALRHFAASALATLRTNDLLGRSGGEEFIVLLPGAALGAA 609
            LDLD FK +ND  GH  GD  L+   A   A++R  D + R GG+EF+VLL G   G+ 
Sbjct: 697 FLDLDHFKHINDSLGHPVGDTVLKIITARLEASVRLEDTVARLGGDEFVVLLSGLE-GSR 755

Query: 610 KLIGERLRAAVQD------KPLSWQGRSVALSVSIGLA-SRQIGDTPDSLLGRADQALHL 662
           + + E++R           +P+S  G+ + ++ SIG+A     G TP  LL RAD AL+ 
Sbjct: 756 EHVEEKVRELADTLRELLAEPMSLDGQRLQVTPSIGVALIPDHGTTPADLLKRADIALYR 815

Query: 663 AKANGRN 669
           AK +GRN
Sbjct: 816 AKDSGRN 822



 Score = 40.0 bits (92), Expect = 6e-07
 Identities = 33/144 (22%), Positives = 61/144 (42%), Gaps = 2/144 (1%)

Query: 375 REIGERRIVESHLRQSETRYRMMIEAAPFGVLISSLSTDHIVQINARAEDQLQAMRHWVI 434
           REI  +R  E+ L  SE R+  +   +P  +L++      I ++N   ED        VI
Sbjct: 141 REITRQRERETALINSEKRFATLFHLSPNAILLTRRRDGMIFEVNQHFEDMFGWPGSQVI 200

Query: 435 DKPFAD--LFVDPADHRRLLDTLNKTGSIANFVALLRTATDNDFWAELSAAVIDLDRSPA 492
            K   +  L+V+P    +++++    G         R  +       L    I+L+    
Sbjct: 201 GKTSLELGLWVNPEQRHQIVESTRANGGPLIMEVQFRATSGKVHDGILCTQGIELEGVTF 260

Query: 493 VFASFNDISQTKALERELRALAER 516
           + ++F D ++ K  E+ L+   ER
Sbjct: 261 LISTFVDTTERKRAEQALKDSQER 284