Pairwise Alignments

Query, 276 a.a., ABC-2 transporter component (NCBI) from Rhodospirillum rubrum S1H

Subject, 388 a.a., Inner membrane transport permease YhhJ from Xanthobacter sp. DMC5

 Score = 61.6 bits (148), Expect = 3e-14
 Identities = 50/185 (27%), Positives = 85/185 (45%), Gaps = 5/185 (2%)

Query: 77  GMLLMMVLFASVFSTITVIEDRDQGFLQGVLVAPVSRLAIVLGKVGGAAAIALFQSIVLL 136
           G++  + + + + +   +I +R+ G L+ +LV PV    I+L KV    A+ L  ++V L
Sbjct: 195 GLITNITMLSVLLAGAALIREREHGTLEHLLVLPVRPSEIMLAKVVANGAVILVATLVSL 254

Query: 137 CAAP--VLGFSTGPLGYLLILVTLTLLSLGFTG-LGFLTAWGMASTSGFHAVMMLVLMPL 193
            A    VLG S    G + + +    L L FT  LG        S   F  +  LV++P+
Sbjct: 255 VAVLKWVLGVSIA--GSIPLFLAGAALYLFFTASLGIFLGTLAGSMPQFGLLFFLVVLPM 312

Query: 194 WFLSGALFPVQGVPAVLEGLMMINPVTHGMTILRAPFYEAPGALLSDGSYLGSLAVVALW 253
             LSG   P++ +P  L+  M  +P T  +   +A  Y   G       +  +  + AL+
Sbjct: 313 NMLSGGFTPLESMPQWLQVTMQASPSTQFVAFAQAILYRGAGLETVWPRFAATFGIGALF 372

Query: 254 VVLAL 258
             +AL
Sbjct: 373 FAVAL 377