Pairwise Alignments

Query, 276 a.a., ABC-2 transporter component (NCBI) from Rhodospirillum rubrum S1H

Subject, 275 a.a., Efflux ABC transporter, permease protein from Variovorax sp. SCN45

 Score = 65.5 bits (158), Expect = 1e-15
 Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 10/228 (4%)

Query: 38  LAGSIGQPLLFWLVLGSGLSPSFRPTGM--AAMSYTEYFYPGMLLMMVLFASVFSTITVI 95
           L G+I +PL++ +  G G+        +    + Y  +   G + M  + A+ F  +   
Sbjct: 44  LIGNIAEPLIWLVAFGYGMGALVGQVSVDDVKVPYILFLASGSICMSAMNAASFEALYSA 103

Query: 96  EDRD--QGFLQGVLVAPVSRLAIVLGKVGGAAAIALFQSIVLLCAAPVLGFSTGPLGYLL 153
             R   Q    G++ APV    IVL ++  AA  ++F    +L     LG S  P    L
Sbjct: 104 FSRMHVQKTWDGIMNAPVGLDDIVLAEMLWAAFKSIFTVTAILFVMLGLGISHSPK---L 160

Query: 154 ILVTLTLLSLGFTGLGFLTAWGMASTSG--FHAVMMLVLMPLWFLSGALFPVQGVPAVLE 211
           ++  + L+  G T       +   +     F     L + P+ FLSG  FP++ +PA + 
Sbjct: 161 VVAWMVLVGAGITFSSVALIFNALAKGYDFFTYYFTLFMTPMMFLSGVFFPLEQLPAAVR 220

Query: 212 GLMMINPVTHGMTILRAPFYEA-PGALLSDGSYLGSLAVVALWVVLAL 258
            +    P+T+ + ++R  F +  P       + L   AVVA W+ LAL
Sbjct: 221 AVAAWLPLTNAVALVRPLFMDQWPTGWWVHAAVLAVYAVVAFWIALAL 268