Pairwise Alignments

Query, 276 a.a., ABC-2 transporter component (NCBI) from Rhodospirillum rubrum S1H

Subject, 260 a.a., multidrug ABC transporter permease from Magnetospirillum magneticum AMB-1

 Score =  315 bits (807), Expect = 6e-91
 Identities = 154/253 (60%), Positives = 191/253 (75%)

Query: 19  VAFALAKREFTRFVRQPARLAGSIGQPLLFWLVLGSGLSPSFRPTGMAAMSYTEYFYPGM 78
           VA++LAKREFTRF+RQP R+ G++ QPLLFWL LG+G   SFRP GM  ++Y EYFYPG+
Sbjct: 7   VAYSLAKREFTRFIRQPQRVVGTVAQPLLFWLFLGAGFGGSFRPAGMENVTYLEYFYPGV 66

Query: 79  LLMMVLFASVFSTITVIEDRDQGFLQGVLVAPVSRLAIVLGKVGGAAAIALFQSIVLLCA 138
           +LMM+LFAS+FS+IT+IEDRD GFLQGVLVAPVSRLAIVLGKV GA +IA+ Q+++   A
Sbjct: 67  MLMMMLFASIFSSITIIEDRDAGFLQGVLVAPVSRLAIVLGKVLGATSIAMIQTLIFTIA 126

Query: 139 APVLGFSTGPLGYLLILVTLTLLSLGFTGLGFLTAWGMASTSGFHAVMMLVLMPLWFLSG 198
           AP LG   G    +L+L+   L  +GF+ LGFL AWGM STS FHAVMM+ LMPLW LSG
Sbjct: 127 APFLGLHLGAGSLVLLLMGFLLTGIGFSALGFLLAWGMKSTSAFHAVMMVFLMPLWMLSG 186

Query: 199 ALFPVQGVPAVLEGLMMINPVTHGMTILRAPFYEAPGALLSDGSYLGSLAVVALWVVLAL 258
           ALFP+  VPA ++ +M+ NPV+H + I+RAPFY  P  L +D  YL SLAV   W  + L
Sbjct: 187 ALFPIGNVPAWMKAVMLANPVSHALVIIRAPFYGGPERLFTDTHYLVSLAVTLAWAGICL 246

Query: 259 GASAWRVGRRERG 271
           G S  RV RRE+G
Sbjct: 247 GLSMARVNRREKG 259