Pairwise Alignments

Query, 327 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

Subject, 363 a.a., Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) from Variovorax sp. SCN45

 Score =  129 bits (324), Expect = 1e-34
 Identities = 101/322 (31%), Positives = 155/322 (48%), Gaps = 28/322 (8%)

Query: 2   IRIDDLSHAYPGRRGKPARLALRDLTLGVAEGSFTILAGPNGSGKSTLFRILCGLCLPSS 61
           + +D L   YPG       +A   ++L V +G F  L GP+G GK+T+ R++ GL  P+ 
Sbjct: 4   LTLDRLEKRYPGH------VAASSVSLSVHDGEFISLLGPSGCGKTTVLRMVAGLIEPTG 57

Query: 62  GRVRIGGHDLLAAPAAARALMSVVFQSPAVDKQLSVAENLALHGRLYGLSGKALAARRDE 121
           GR+ + G D+ A P   R +  +VFQS A+   +SV EN+A   R  G+ G  L  R D+
Sbjct: 58  GRILVDGRDITALPTNRRNI-GLVFQSYALFPHMSVFENVAFGLRRQGMQGSELKQRVDQ 116

Query: 122 ALAWSGLEGRLGDRV-GTLSGGLARQVELAKCLLTYPRVLLLDEPTSGLDPAARRAFLDA 180
           ALA   L   LGDR+   LSGG  ++V +A+ +   P +LL DEP S LD + R      
Sbjct: 117 ALASVRLSA-LGDRMPKQLSGGQQQRVAVARSIAPRPSILLFDEPLSNLDASLRDEMQIE 175

Query: 181 LTAIQRQRKMTVLMTSHVFSEAED-ADKVAILRDGDLLAHDSPAALRRQLGRDMLVVTAR 239
           L  +QR+  +T L  +H   EA   +D+V +L  G +   D+P A+  +     +     
Sbjct: 176 LKRLQREVGITTLFVTHDQGEAMSMSDRVCVLAHGVVQQFDTPEAIYHRPATGFVA---- 231

Query: 240 DAEALAPRLGQTLGLAVSRHGAEIRIEAIPASGPVPLIDAILSAFRGDIQSIAVRQPTLE 299
              +   R  +  G  V  +GA   ++     GP+    A     +G    + +RQ   E
Sbjct: 232 ---SFIGRPNRLTGRVVRANGASAAVQL--DDGPMLPASAAEGMVQGAAVDVVIRQ---E 283

Query: 300 DVFIHITGTTASRPRPGSVSAA 321
           D+        A  P PG+ + A
Sbjct: 284 DI------RFADAPSPGAATLA 299