Pairwise Alignments

Query, 247 a.a., Transcriptional Regulator, AraC family (NCBI) from Rhodospirillum rubrum S1H

Subject, 271 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  176 bits (446), Expect = 4e-49
 Identities = 97/238 (40%), Positives = 132/238 (55%), Gaps = 2/238 (0%)

Query: 5   RSVRARTSEWPTGTVIVPHSHPWCQLVYAIGGVTIVETPEGSWVVPPDRAVWVPAGITHC 64
           R + A       G    PH+H   QL+YA+ GV         W +PP RA+W+PA   H 
Sbjct: 29  RVLMALVRNQAAGAYNAPHTHRHGQLLYAVSGVMRAVAQGSLWFLPPKRALWIPAEEEHD 88

Query: 65  VRAARGGQNRSVYVTIEAAQAAGLPKGCKVVAVSPLTRELILEFGRRPDDYDEDGADGRL 124
                  Q RS+Y+  +AA  AG    C++V VS L RELIL     P +Y+ +G +  +
Sbjct: 89  QLMLTPVQMRSIYIQADAA--AGFGDRCRIVDVSLLLRELILVLANEPIEYELEGRNSHV 146

Query: 125 VRVLLDQIAALPAQPLHLPWPRDPRALAVARALEADPADGRPLEEWAREAGASARTLART 184
           V ++L ++AA    PL +PWP D R L V RA+   P     +E WA + GAS+RTL R 
Sbjct: 147 VALILSELAAARTLPLQIPWPVDRRLLVVCRAILEAPGQTHRVEYWADQVGASSRTLIRL 206

Query: 185 FRADCGLTFGQWRLRLRLLGALERLAAGEAVTAVAFDMGYDQPSAFIAMFRRLLGTTP 242
           F  + GLT+ QW  ++RL  ALERL  GE +  +A D+GY   SAF AMFRR +G +P
Sbjct: 207 FLKETGLTYRQWVQQVRLACALERLENGEPIGRIAQDLGYVSASAFSAMFRRAIGVSP 264