Pairwise Alignments

Query, 247 a.a., Transcriptional Regulator, AraC family (NCBI) from Rhodospirillum rubrum S1H

Subject, 259 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  194 bits (493), Expect = 1e-54
 Identities = 109/240 (45%), Positives = 139/240 (57%), Gaps = 3/240 (1%)

Query: 5   RSVRARTSEWPTGTVIVPHSHPWCQLVYAIGGVTIVETPEGSWVVPPDRAVWVPAGITHC 64
           R + AR      G+    H H W Q  YAI GV  V T +GS+  PP   VW+PA   H 
Sbjct: 18  RPLYARAESLGAGSWTTRHQHDWVQFSYAISGVLGVYTRDGSYFAPPQWGVWIPADAEHE 77

Query: 65  VRAARGGQNRSVYVTIEAAQAAGLPKGCKVVAVSPLTRELILEFGRRPDDYDED-GADGR 123
           V  +   + RS+YV  +A   A  P+ C+V+ V+PL RELI +F   P DY ED  A+ R
Sbjct: 78  VVTSMQAEMRSLYVRRDACPWA--PEQCRVLEVTPLARELIKQFCLFPADYPEDDSAEAR 135

Query: 124 LVRVLLDQIAALPAQPLHLPWPRDPRALAVARALEADPADGRPLEEWAREAGASARTLAR 183
           LV VLLDQ+ +LP     LP PR P  LA+   L A P   + L++WARE G S +TL R
Sbjct: 136 LVAVLLDQLRSLPEVGFSLPLPRHPGLLALCNGLIAAPDQPQTLQQWARELGCSEKTLMR 195

Query: 184 TFRADCGLTFGQWRLRLRLLGALERLAAGEAVTAVAFDMGYDQPSAFIAMFRRLLGTTPG 243
            F+ + GL+F  WR R+RLL +L  L AGE VT  A   GYD  SA+IA F++L G TPG
Sbjct: 196 LFQRETGLSFRNWRQRMRLLSSLALLEAGENVTEAALGCGYDSTSAYIAAFKQLFGATPG 255