Pairwise Alignments

Query, 563 a.a., chemotaxis sensory transducer (NCBI) from Rhodospirillum rubrum S1H

Subject, 571 a.a., methyl-accepting chemotaxis protein from Magnetospirillum magneticum AMB-1

 Score =  305 bits (780), Expect = 4e-87
 Identities = 183/385 (47%), Positives = 252/385 (65%), Gaps = 9/385 (2%)

Query: 180 DAADATFQTLTRWMFGVAFGGIVLGVIAGL-LIAR---RGMVQPIGSLVGSLQALTAGDL 235
           D   A F+T       V FG   LG++A + LIA    RG+ +P+G + G+L  LT+ D 
Sbjct: 174 DDVSAAFRTRA-----VEFGAAALGILALVWLIAAWVGRGITRPLGDVTGALDRLTSDDH 228

Query: 236 ERAIDGTERKDEVGDIARSALIFRDNARKAQELREAQAAEQVARAKRSAAIESLTRDFDH 295
              I  T R DE+G +AR   +F+ +   A    E +  +Q A   R + I +LT +FD 
Sbjct: 229 SVEIRHTGRTDEIGALARGLKVFQTHIEAAARAAEEKLRQQEADLARQSRIAALTSEFDA 288

Query: 296 AVSDVLGVVAGACAEMETTAGGLSATADQTNIQASAVATATEQASASVQTVATAAEELSA 355
            V+ V+  V  A A+M++T+  +SA ADQT  Q++AVA A   A+ SVQTVA A EEL A
Sbjct: 289 KVAGVIKSVGAAAAQMQSTSQSMSAIADQTARQSTAVAAAANHAAMSVQTVAAATEELHA 348

Query: 356 SISEIGRRMEQSSHVAQIASQEAAQTNATVQSLADTSARIGAVIGLITDIANQTNLLALN 415
           S +EI R++E S+  ++ A QEA +++  V  L   + RIG V+ LI DIA+QTNLLALN
Sbjct: 349 SEAEIARQVEVSTSRSRTAVQEAERSSEIVSGLNSAAGRIGEVVALINDIASQTNLLALN 408

Query: 416 ATIEAARAGEAGKGFAVVAGEVKHLASQTAKATEDIGTQIGAVQEATEGAVKAIASIVRR 475
           ATIEAARAGEAGKGFAVVA EVK+LA+QTA+AT++I +QIG VQ A   A +AIA+IV  
Sbjct: 409 ATIEAARAGEAGKGFAVVANEVKNLANQTARATDEISSQIGEVQSAATLAAEAIAAIVNT 468

Query: 476 IEEINTISAAIAAAVEEQSAATAEIARNVQQAAAGTQEVSDTIVGVSSSAGETGNASQQV 535
           I EI+  S+ +A AV++QSAAT EIAR+++QAA GT EVS+ I  VS +A   G+ + +V
Sbjct: 469 IAEIDETSSVVAIAVDQQSAATTEIARSIEQAATGTAEVSNNIGEVSDAARHAGSTASEV 528

Query: 536 LSAAQALSKEAVALKGLVERFLGGV 560
           L+AA  L+ +A AL+  VE+FL  +
Sbjct: 529 LAAAAELTGQADALRTEVEQFLNAI 553