Pairwise Alignments

Query, 563 a.a., chemotaxis sensory transducer (NCBI) from Rhodospirillum rubrum S1H

Subject, 688 a.a., HAMP domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  299 bits (765), Expect = 3e-85
 Identities = 188/414 (45%), Positives = 255/414 (61%), Gaps = 9/414 (2%)

Query: 154 RAISNPLLDSTLALSDDLDDEGTKVGDAA--DATFQTLTRWMFGVAFGGIVLGVIAGLLI 211
           R  S P+L + + + D    E  +V D    +A    L      +A  G++  V+ G+  
Sbjct: 280 RRQSAPMLQAIMLMRDAAIGEARRVADEKRDNALRNLLLMGGLMLAAAGVLAFVVVGI-- 337

Query: 212 ARRGMVQPIGSLVGSLQALTAGDLERAIDGTERKDEVGDIARSALIFRDNARKAQE--LR 269
             R +V P+  L   +     G  + ++    R DE+G +A +  + RDNAR+A     R
Sbjct: 338 -GRRVVAPLAELTRVIGDFAGGSRDFSVPHAGRTDEIGAMATAIQVLRDNAREADSRAAR 396

Query: 270 EAQAAEQVARAKRSAAIESLTRDFDHAVSDVLGVVAGACAEMETTAGGLSATADQTNIQA 329
           E +AA    R +    +E++T  F  ++  V+G VA A   +  +   LS TA  T  Q+
Sbjct: 397 EEEAAR--LRDQHRQRVEAVTTTFVDSIDSVVGGVATAVNGLRASTETLSQTATTTTEQS 454

Query: 330 SAVATATEQASASVQTVATAAEELSASISEIGRRMEQSSHVAQIASQEAAQTNATVQSLA 389
           + VA+A E+AS +VQTVA AAEELS SI EI RR+ +++     A +EA  TNATV+ LA
Sbjct: 455 TVVASAAEEASTNVQTVAAAAEELSHSIQEISRRVAETATATDGAVREAEATNATVRGLA 514

Query: 390 DTSARIGAVIGLITDIANQTNLLALNATIEAARAGEAGKGFAVVAGEVKHLASQTAKATE 449
           + + RIG V+ +ITDIA+QTNLLALNATIEAARAG+AGKGFAVVAGEVK+LA+QTA+AT+
Sbjct: 515 EAARRIGDVVNMITDIASQTNLLALNATIEAARAGDAGKGFAVVAGEVKNLANQTARATD 574

Query: 450 DIGTQIGAVQEATEGAVKAIASIVRRIEEINTISAAIAAAVEEQSAATAEIARNVQQAAA 509
           DI  Q+GA+Q  TE AV AI  I   I  +N  +  IA+AVEEQ AAT EIARNVQQAAA
Sbjct: 575 DIQAQVGAIQAETERAVAAIGGIATTIATVNDYTMGIASAVEEQGAATQEIARNVQQAAA 634

Query: 510 GTQEVSDTIVGVSSSAGETGNASQQVLSAAQALSKEAVALKGLVERFLGGVRAA 563
           GT EVS +I  V  +A +TG A+QQ+   A  LS E+  L+G V  F+  VRA+
Sbjct: 635 GTSEVSQSIGKVLDAARQTGVAAQQLSGLADGLSGESDRLRGNVGGFIAEVRAS 688