Pairwise Alignments

Query, 563 a.a., chemotaxis sensory transducer (NCBI) from Rhodospirillum rubrum S1H

Subject, 682 a.a., HAMP domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  294 bits (753), Expect = 7e-84
 Identities = 172/417 (41%), Positives = 256/417 (61%), Gaps = 8/417 (1%)

Query: 147 YDAVTVSRAISNPLLDSTLALSDDLDDEGTKVGDAADATFQTLTRWMFGVAFGGIVLGVI 206
           +D +T    +   + D   A   D+ D+G       DAT   L   + G+    + LG+I
Sbjct: 274 FDTITRKIDLLKQVEDMASAALVDMADKGH------DATLSALYASL-GITLAVLTLGII 326

Query: 207 AGLLIARRGMVQPIGSLVGSLQALTAGDLERAIDGTERKDEVGDIARSALIFRDNARKAQ 266
              +IAR G+ +P+ ++   +  L  GD    I+G ER+DE+G +AR+  IF+D   +A 
Sbjct: 327 LISVIAR-GITRPLAAMTFDMTRLAEGDKTVLIEGLERRDEIGAMARAVEIFKDGLIRAD 385

Query: 267 ELREAQAAEQVARAKRSAAIESLTRDFDHAVSDVLGVVAGACAEMETTAGGLSATADQTN 326
            L + +   +VA+ +R+  I++L R+F+  V D L  +A    E+E T+  LS+TA+  +
Sbjct: 386 RLEQERHQTEVAKDRRARVIDNLLREFNDEVGDALSGMASTATELEATSRSLSSTAEGAS 445

Query: 327 IQASAVATATEQASASVQTVATAAEELSASISEIGRRMEQSSHVAQIASQEAAQTNATVQ 386
            QASAVA   E+ + +++T A +AE+L+ +  +I R+++ S  +++ AS EA +T   + 
Sbjct: 446 AQASAVAAGIEETAVNMRTAAGSAEQLAHTGKDITRKVQDSVRISEEASAEARRTTQLID 505

Query: 387 SLADTSARIGAVIGLITDIANQTNLLALNATIEAARAGEAGKGFAVVAGEVKHLASQTAK 446
            LA    +IGAV+ LI DIA QTNLLALNATIEAARAG+AGKGFAVVA EVKHLA+QTAK
Sbjct: 506 GLASAVDKIGAVVALINDIAAQTNLLALNATIEAARAGDAGKGFAVVANEVKHLANQTAK 565

Query: 447 ATEDIGTQIGAVQEATEGAVKAIASIVRRIEEINTISAAIAAAVEEQSAATAEIARNVQQ 506
           AT++I  QI  VQ+ T  AV AI +I   IE+++ ++  IA AV+ Q +AT EIA NV Q
Sbjct: 566 ATDEIAGQISTVQKVTGEAVSAITAITSVIEQVHDVATGIAQAVQGQDSATGEIAANVTQ 625

Query: 507 AAAGTQEVSDTIVGVSSSAGETGNASQQVLSAAQALSKEAVALKGLVERFLGGVRAA 563
            A  T E+S  + GV+ +A ET  AS +VL  AQ +S+ A  L+  V+ FL  +R +
Sbjct: 626 VATATGEISANVAGVNHAAEETRQASAEVLQTAQDVSERANRLRDRVDSFLTSIRTS 682