Pairwise Alignments

Query, 357 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

Subject, 282 a.a., glycine betaine ABC transporter (permease) from Pseudomonas putida KT2440

 Score =  234 bits (597), Expect = 2e-66
 Identities = 122/267 (45%), Positives = 182/267 (68%), Gaps = 1/267 (0%)

Query: 50  DWTNQGLDWLVLSFRPLFQAIRWPIDAVLTALNGTLVGVPPPVMLAIIALLAWQIAGRKM 109
           D  N+ +DWLVL++    +++   +  +L  L   L  +P  ++L ++ LLAW  +   +
Sbjct: 15  DSINRLVDWLVLNYGDHLRSLSDQLLQLLVGLENLLRLLPWWLLLLLVGLLAWHASRSLL 74

Query: 110 AIGSLISM-TLIGLIGAWSEAMLTLSLVLTSVMFCIALGLPSGILMARSDRLAKLSRPLL 168
               L+++  LIG++G W + + TL+LVL S   C+ +G+P GIL+A      +L  P+L
Sbjct: 75  RSAVLVALLALIGMLGLWDKLLQTLALVLVSTGLCVLVGVPLGILLAARPLARRLLLPVL 134

Query: 169 DAMQTTPAFVYLVPIVMLFGIGNVPGVVVTIIFALPPLIRLTNLGIRQVPEDLVEAARSF 228
           D MQT PAFVYL+P++MLFG+G VP V  T+I+ALPPL+RLT LG+ Q+   L++AA   
Sbjct: 135 DVMQTLPAFVYLIPVLMLFGLGKVPAVFATLIYALPPLVRLTELGLSQIDPSLLQAAHGL 194

Query: 229 GASKTQLLTKVQLPLALPTIMAGINQTLMLALSMVVIASMIAVGGLGQMVLRGIGRLDMG 288
           GAS+ Q L ++ LPLALP+IMAG+NQ++M+ALSMVV+ASMI   GLG+ VL GI  L++G
Sbjct: 195 GASRWQRLRRIALPLALPSIMAGLNQSVMMALSMVVVASMIGARGLGEDVLAGIQTLNVG 254

Query: 289 LATVGGVAIVLLAILIDRLTQSMGVAS 315
                G+AIV LA++IDR++Q+ G +S
Sbjct: 255 QGMEAGLAIVALAMVIDRISQAYGRSS 281