Pairwise Alignments

Query, 357 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

Subject, 281 a.a., choline / betaine / carnitine ABC transporter - membrane subunit from Pseudomonas putida KT2440

 Score =  205 bits (521), Expect = 1e-57
 Identities = 109/264 (41%), Positives = 169/264 (64%), Gaps = 3/264 (1%)

Query: 46  IPLDDWTNQGLDWLVLSFRPLFQAIRWPIDAVLTALNGTLVGVPPPVMLAIIALLAWQIA 105
           IPL  +    ++WL  +    F AI   ++ ++  +   L    P V++A+ A LA  I 
Sbjct: 7   IPLGQYIASFVEWLTQNGANYFDAIAQGLEFMIHGVTSALTFFNPFVLIALFAALAHFIQ 66

Query: 106 GRKMAIGSLISMT--LIGLIGAWSEAMLTLSLVLTSVMFCIALGLPSGILMARSDRLAKL 163
            RK A+ + ++++  LI  +G W E M TL+ V  + + C+ +G+P GIL A        
Sbjct: 67  -RKWALTAFVALSFLLILNLGYWQETMETLAQVTFATVVCVVIGVPLGILAAHKPMFYTA 125

Query: 164 SRPLLDAMQTTPAFVYLVPIVMLFGIGNVPGVVVTIIFALPPLIRLTNLGIRQVPEDLVE 223
            RP+LD MQT P FVYL+P + LFG+G VPG++ T++FA+   IRLT LGI  VP++L++
Sbjct: 126 MRPVLDLMQTVPTFVYLIPTLTLFGLGVVPGLISTVVFAIAAPIRLTYLGICDVPQELMD 185

Query: 224 AARSFGASKTQLLTKVQLPLALPTIMAGINQTLMLALSMVVIASMIAVGGLGQMVLRGIG 283
           A ++FG S+ QLLT+++LP A+P+I AG+ Q +ML+LSMVVIA+++   GLG+ V+  + 
Sbjct: 186 AGKAFGCSRRQLLTRIELPHAMPSIAAGVTQCIMLSLSMVVIAALVGADGLGKPVVNALN 245

Query: 284 RLDMGLATVGGVAIVLLAILIDRL 307
             D+ L    G+AIVLLAI++DR+
Sbjct: 246 TADISLGFEAGLAIVLLAIMLDRI 269