Pairwise Alignments

Query, 525 a.a., extracellular solute-binding protein, family 5 (NCBI) from Rhodospirillum rubrum S1H

Subject, 533 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 77.0 bits (188), Expect = 2e-18
 Identities = 117/501 (23%), Positives = 183/501 (36%), Gaps = 84/501 (16%)

Query: 1   MTAWIVLTAPAASTAAEFRWTAAQGPATLEPQSPEALADPGVLGD-VYETLIG-RDSDLD 58
           + A ++   P A  A+   + +   PA  +P    +  D     + V+  L   +    +
Sbjct: 11  LAAGLLACMPLAQAASTLVYCSEASPAGFDPSQYTSGTDFDASAETVFNRLTQFKRGGTE 70

Query: 59  LEPALATAWQAVTD-LRWRVTLRRGVRFHDGAAFT------ADDVVASLERASARGGGLA 111
           +EP LAT+W    D L +   LR GV+FH    F+      ADDV+ +  R         
Sbjct: 71  VEPGLATSWDISQDGLTYTFHLRDGVKFHTTDFFSPTRDFNADDVLFTFNRLLDAQSPFR 130

Query: 112 EAL-------------APVRRVRRVDDTTVDLYTQTPTPDLPQRLAL-----------IR 147
           +A                ++ V ++DD TV            Q LA+            +
Sbjct: 131 QAYPSESPYFTDMGLNTTIKSVDKLDDHTVRFNLNNVDASFVQNLAMSFASVQSAEYAAQ 190

Query: 148 ILDDGWIARADPAMPANGTGPFRVDRFTPGGAVTLVANGDWWGRTIPADPLGTTAPPAPR 207
           +L  G     +      GTGPF   R+     +  VAN  +W             P   +
Sbjct: 191 LLKQGKAEEIN--QKPVGTGPFVFKRYQKDSQIRYVANKQYW------------KPEDVK 236

Query: 208 LERATLIPAARPADRLRLLLEGKVDLALDLPPAVVPPLAATPGLRALVIGGTRTVMLGMD 267
           L+          A RL+ L  G+  ++    PA +  +   P L  L   G     L  +
Sbjct: 237 LDNLVFAITPDAASRLQKLKAGECQVSGYPRPADIEVMKQDPNLHVLQQAGFNLGFLAYN 296

Query: 268 QRPPPLGAARGQGSPFRDRLLREAVLRAVDMTDIDQ-------RLFANQATPAALIAGPM 320
              PPL   +          +R+A+  A+D   I +       +L  N   PA     P 
Sbjct: 297 VTHPPLDQLK----------VRQALDMAIDKPAIIKAVYQSAGQLAQNALPPAQWSYDPT 346

Query: 321 IAGVPAAADIRPAADPDRARALLAEAGVGPAGVSVTL-DCPLGFFLNDGALCDA--IATS 377
           I   P         DP +A+ALL EAGV P G +V L    +    N  A   A  I   
Sbjct: 347 IKDAP--------YDPTKAKALLKEAGVAP-GTTVNLWAMTVQRASNPNARMSAQMIQQD 397

Query: 378 LSEVGIHTAVATRLAENHFPRVLRGESRFFLTGYQPLTLDILDPLRALAACPPTDGSPKD 437
             +VGI   + +     +  R   GE    + G+     D  + L  L +C    GS   
Sbjct: 398 WEKVGIKANIVSYEWGEYIKRAKNGEHDAMIYGWTGDNGDPDNWLGVLYSCAAVKGS--- 454

Query: 438 GFGQANGAGYCDPSVDRLIRR 458
                N A +C+P+ D+L+++
Sbjct: 455 -----NYAKWCNPAYDKLVQQ 470