Pairwise Alignments

Query, 525 a.a., extracellular solute-binding protein, family 5 (NCBI) from Rhodospirillum rubrum S1H

Subject, 533 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score = 87.8 bits (216), Expect = 9e-22
 Identities = 130/505 (25%), Positives = 192/505 (38%), Gaps = 51/505 (10%)

Query: 11  AASTAAEFRWTAAQGPATLEPQS-PEALADPG--------VLGDVYETLIGRDSDLDLEP 61
           AA  AA     +  G  TL   S P AL   G        V   V E L+  D D++ +P
Sbjct: 20  AAGLAAHAAPPSHSGTLTLLSTSEPTALVTIGNVATPILSVSAKVTEGLLKYDYDVNPQP 79

Query: 62  ALATAWQAVTD-LRWRVTLRRGVRFHDGAAFTADDVVASLERASARGGGLAEALAPVRRV 120
            LAT W    D L +  TLR+GV++HDG  FT+ DV  S+E             A +  +
Sbjct: 80  QLATKWVISPDGLTYTFTLRQGVKWHDGKDFTSADVAYSIELLKKIHPRGRNTFANLTAI 139

Query: 121 RRVDDTTVDLYTQTPTPDLPQRLALIR--ILDDGWIARADPAMPAN-----GTGPFRVDR 173
              D  T  L    P P L + L      I+        DPA   N     GTGPF+   
Sbjct: 140 DTPDKYTAILRLSKPAPYLIRALVATETPIVPKHIYEGTDPANNPNNNAPIGTGPFKFKE 199

Query: 174 FTPGGAVTLVANGDWWGRTIPADPLGTTAPPAPRLERATLIPAARPADRLRLLLEGKVDL 233
           +  G  +    N D+W +            P P +++  +     PA        G VDL
Sbjct: 200 WVRGSHIVYERNNDYWDK------------PKPFVDQLIVRFVTDPAAAAVAFETGTVDL 247

Query: 234 A--LDLPPAVVPPLAATPGLRALVIGGTRTVMLGMDQRPPPLGAARGQGSPFRDRLLREA 291
                +P A +  L   P LR    G + +  +   +              F++  +R+A
Sbjct: 248 GYRTPVPLADLERLKKVPALRFETKGNSYSSNVTRLE-------FNLDNEYFKNEKVRQA 300

Query: 292 VLRAVDMTDIDQRLFANQATPAALIAGPMIAGVPAAADIRP---AADPDRARALLAEAGV 348
           V  A+D   I + +         +   P+  G+ A  D  P   A D  +A ALL EAG 
Sbjct: 301 VAHAIDRNVIVKVVNYGY---GQVSYSPIAPGLKAFHDPAPSPYAFDVKKANALLDEAGF 357

Query: 349 GPAGVSVTLDCPLGF--FLNDG-ALCDAIATSLSEVGIHTAVATRLAENHFPRVLRGESR 405
                 V    PL F     DG  L D + ++L+ +GI   V  +       R+      
Sbjct: 358 PKKAGGVRFSVPLDFNPIGADGPRLADYLRSALARIGIAVTVRAQDPSAFIKRIYTDRDF 417

Query: 406 FFLTGYQPLTLDILDPLRALAACPPTDGSPKDGFGQANGAGYCDPSVDRLIRRLADEMIP 465
            F         ++ DP   +     +    K G   +NG  Y +P VD+L+   A E  P
Sbjct: 418 AFTHNG---ASNLFDPTVGVQRLYWSKNFIK-GVPFSNGTHYQNPVVDKLLEDAAVENDP 473

Query: 466 ARQSALAAEIVLKLRDDVVYVPLHQ 490
            ++  L  +    +  DV  + L+Q
Sbjct: 474 GKRLKLFKDFQDTVARDVPDLNLYQ 498