Pairwise Alignments

Query, 525 a.a., extracellular solute-binding protein, family 5 (NCBI) from Rhodospirillum rubrum S1H

Subject, 541 a.a., dipeptide ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

 Score = 66.2 bits (160), Expect = 3e-15
 Identities = 112/530 (21%), Positives = 198/530 (37%), Gaps = 68/530 (12%)

Query: 3   AWIVLTAPAASTAAEFRWTAAQGPATLEPQSPEALADPGVLGDVYETLIGRDSDLD---- 58
           A ++  AP+A  A+   + +   PA  +P       D        ET+  R +  +    
Sbjct: 13  AGLLSGAPSAVAASNLVFCSEGSPAGFDPGQYTTGTDFDASA---ETVFNRLTQFERGGT 69

Query: 59  -LEPALATAWQAVTDLR-WRVTLRRGVRFHD------GAAFTADDVVASLERASARGGGL 110
            + P LAT W+   D + +   LR GV+FH          F ADDV+ +  R   +    
Sbjct: 70  AVIPGLATKWEVSDDGKTYTFHLREGVKFHTTDYFKPSRPFNADDVLFTFNRMLDKDNPF 129

Query: 111 AEALAP-------------VRRVRRVDDTTVDLYTQTPTPDLPQRLALI----------- 146
            +A                + +V ++D+ TV            Q LA+            
Sbjct: 130 RKAYPTEFPYFTDMGMDKNIAKVEKLDEHTVKFTLNEVDAAFIQNLAMSFASIQSAEYAD 189

Query: 147 RILDDGWIARADPAMPANGTGPFRVDRFTPGGAVTLVANGDWWGRTIPADPLGTTAPPAP 206
           ++L +G    AD      GTGPF   ++     +    N D+W             P   
Sbjct: 190 QLLKNG--KAADINQKPIGTGPFVFSKYQKDAQIRFKGNKDYW------------QPEDV 235

Query: 207 RLERATLIPAARPADRLRLLLEGKVDLALDLPPAVVPPLAATPGLRALVIGGTRTVMLGM 266
           +++          + R++ L + +  + L   PA + PL A   L+     G     +  
Sbjct: 236 KIDNLIFAITTDASVRMQKLKKNECQVTLFPRPADIEPLKADKNLQMPQQAGFNLGYIAY 295

Query: 267 DQRPPPLGAARGQGSPFRDRLLREAVLRAVDMTDIDQRLFANQATPAALIAGPMIAGVPA 326
           +      G+   + +P     +R+A+  AVD   I + ++   A   A+ A P       
Sbjct: 296 NVMDKIKGS--NEANPMAQLKVRQALDMAVDKKKIIESVYQG-AGQLAVNAMPPTQWSYD 352

Query: 327 AADIRPAADPDRARALLAEAGVGPAGVSVTL-DCPLGFFLNDGA--LCDAIATSLSEVGI 383
            +    A DP++A+ LL EAG+   G  +TL   P+    N  A  + + + +  +++GI
Sbjct: 353 DSIKDAAFDPEKAKQLLKEAGI-KEGTEITLWAMPVQRPYNPNAKLMAEMLQSDWAKIGI 411

Query: 384 HTAVATRLAENHFPRVLRGESRFFLTGYQPLTLDILDPLRALAACPPTDGSPKDGFGQAN 443
              + +     +  R   GE    L G+     D  + L  L  C   DG+        N
Sbjct: 412 KAKIVSYEWGEYIKRSKGGEQGAMLIGWSGDNGDPDNWLGTLYGCDAVDGN--------N 463

Query: 444 GAGYCDPSVDRLIRRLADEMIPARQSALAAEIVLKLRDDVVYVPLHQEPV 493
            + +C    D LI++       A+++ L  +    L++ V   P+    V
Sbjct: 464 FSKWCYKPYDDLIKQAKATSDQAKRTELYQKAQHILKEQVPITPIAHSTV 513