Pairwise Alignments

Query, 525 a.a., extracellular solute-binding protein, family 5 (NCBI) from Rhodospirillum rubrum S1H

Subject, 530 a.a., dipeptide ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

 Score = 87.0 bits (214), Expect = 2e-21
 Identities = 116/497 (23%), Positives = 190/497 (38%), Gaps = 67/497 (13%)

Query: 26  PATLEPQSPEALADPGVLGDVYETLIGRD-SDLDLEPALATAWQAVTD-LRWRVTLRRGV 83
           PA  +     +  D      +Y  L+  +     + PALAT W+   + LR+   LR GV
Sbjct: 35  PAGFDTAQYTSATDNDAAEPIYNRLVEFERGGTAVHPALATHWEVSDNGLRYTFHLREGV 94

Query: 84  RFHDGAAFT------ADDVVASLERASARGGGLAEALAP-------------VRRVRRVD 124
           RFH   AF+      ADDV+ +  R   +G    +A                + RV + D
Sbjct: 95  RFHSNKAFSPSRTFNADDVLFTFNRMLDKGHRFRQAYPTEFPYFNGMGLDKNIARVEKTD 154

Query: 125 DTTVDLYTQTPTPDLPQRLAL--IRILDDGWIAR-------ADPAMPANGTGPFRVDRFT 175
             TV     T      Q LA+    IL   +  +       +D      GTGPF   R+ 
Sbjct: 155 PLTVVFTLNTVDAAFIQNLAMSFASILSAEYAEQLLASGRPSDINQQPIGTGPFVFQRYQ 214

Query: 176 PGGAVTLVANGDWWGRTIPADPLGTTAPPAPRLERATLIPAARPADRLRLLLEGKVDLAL 235
               +    N D+W            A    +++         P+ R++ L   +  + L
Sbjct: 215 KDSQIRYKGNKDYW------------AANEVKIDNLVFSINTDPSVRIQKLRRNECQVTL 262

Query: 236 DLPPAVVPPLAATPGLRALVIGGTRTVMLGMDQRPPPLGAARGQGSPFRDRL-LREAVLR 294
              PA +P L A   L+ L   G     +  + + PP            DRL +R+A+  
Sbjct: 263 HPRPADLPALKADSTLQVLQQPGFNLGYIAYNTQHPPF-----------DRLEVRQAMDM 311

Query: 295 AVDMTDIDQRLFANQATPAALIAGPMIAGVPAAADIRPAADPDRARALLAEAGVGPAGVS 354
           AV+   I Q ++ +    A     P       +    P A P++AR L+ +AGV P G  
Sbjct: 312 AVNKEAILQAVYQDAGQRAVNAMPPTQWSYDDSIKDAPYA-PEKARQLIQQAGVKP-GTE 369

Query: 355 VTL-DCPLGFFLNDGA--LCDAIATSLSEVGIHTAVATRLAENHFPRVLRGESRFFLTGY 411
           +TL   P+    N  A  + + +    S++G    + +     +  R+  GE    L G+
Sbjct: 370 ITLWAMPVQRPYNPNAKLMAEMLQADWSKLGFKVRIVSYEWGEYLKRMKNGEHDIALIGW 429

Query: 412 QPLTLDILDPLRALAACPPTDGSPKDGFGQANGAGYCDPSVDRLIRRLADEMIPARQSAL 471
                D  + L  L +C        D  G  N + +CDP  D L+++        +++AL
Sbjct: 430 TGDNGDPDNWLGTLYSC--------DAIGSNNYSQWCDPQYDSLVKQAKQVTDRTQRTAL 481

Query: 472 AAEIVLKLRDDVVYVPL 488
             +   +L+  V   P+
Sbjct: 482 YQQAQQRLKQQVPITPV 498