Pairwise Alignments

Query, 550 a.a., PAS/PAC Sensor Signal Transduction Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H

Subject, 908 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score = 88.6 bits (218), Expect = 1e-21
 Identities = 79/261 (30%), Positives = 124/261 (47%), Gaps = 18/261 (6%)

Query: 282 DITEGKRAQDALLVSEKMASLGQLVAGIAHEINTPIGTGVTAASLLAEKTQSLVQAVEAG 341
           D TE +R+Q  L  S KMA+LG++  G+AHEIN P+                +  A+   
Sbjct: 663 DNTEVRRSQQQLTQSAKMATLGEMATGLAHEINQPLNV--------------MRMAIVNV 708

Query: 342 ALRRSQLDAYLHVARESSRFILSNLTRAAELIQSFKQVAVDQATDESRLFKVRDYLEEIL 401
             R S  DA +    E  + I + + RAA ++   + V   ++  E + F     +E  L
Sbjct: 709 LKRLSNGDAQIDYLTEKLQRIDTQVQRAARVVDHMR-VFGRRSEIEQQPFDPSQAVEGTL 767

Query: 402 LSLQPRLKRTPHTMTLECPD-DLAMYGPPGALFRVITNLVINSLMHGLEEGATAPPGHMV 460
             L   L+     + +   D  + + G    L +V+ NL++N+    L +    P     
Sbjct: 768 SLLGDGLRGKGVDVRITPADFTVQVKGHVDQLEQVLINLMVNARDALLSKRQKDPEFRPW 827

Query: 461 LRVGHEKDTDCVVFRYHDTGRGIPEKNLKRIFDPFFTTRRGEGGTGLGLHIVYNLVTQTL 520
           + V  E D+  V     D G GI  + L+RIF+PFFTT+    GTGLGL + Y +V + +
Sbjct: 828 IAVHCEHDSRHVRIWVEDNGDGIDPRLLERIFEPFFTTKPIGVGTGLGLSVSYGIV-ENM 886

Query: 521 GGSLAVHSPPGQGAIFLIRVP 541
           GG L+V +   QGA F + +P
Sbjct: 887 GGRLSVANAE-QGARFCVELP 906