Pairwise Alignments

Query, 550 a.a., PAS/PAC Sensor Signal Transduction Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H

Subject, 1156 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  103 bits (256), Expect = 5e-26
 Identities = 115/410 (28%), Positives = 176/410 (42%), Gaps = 49/410 (11%)

Query: 159  AEQALAEKTRLLDTTLETIAQGIILVDPSLHIVLCNRRYRELLDLPDYMLEPFPPRAADI 218
            A + L     LL   +E I QGI +VD SL +V  NRRY EL + PD ++    P  ADI
Sbjct: 627  ASEVLQFNRALLQGAIENITQGISVVDQSLKLVAWNRRYLELFNYPDGLISVGRP-IADI 685

Query: 219  IAFQIGRGDFDILPAD--VTHRPFWDRIEGFVFSPGTTERPLRDGRTLGVETFALDGGGW 276
            I +   RG      A+  V  R  W R +G      T+ER   +GR + +    + GGG+
Sbjct: 686  IRYNAERGLCGPGEAEVHVARRLHWMR-QG---RAHTSERLFPNGRVIELIGNPMPGGGF 741

Query: 277  VRTFTDITEGKRAQDALL---------VSEKMASLGQLVAGIAHEINTPIGTGVTAASLL 327
            V +FTDIT  + A+ AL          V+ +   L QL   +            +    L
Sbjct: 742  VMSFTDITAFREAEQALTEANEGLEQRVTARTYELSQLNVALTDAKGVAESASQSKTRFL 801

Query: 328  AEKTQSLVQAVEAGALRRSQL----DAYLHVARESSRFILSNLTRAAELIQSFKQVA--- 380
            A  +  L+Q + A  L  + L    D     AR+  + + S+L  A +LI     ++   
Sbjct: 802  AAVSHDLMQPLNAARLFSAALSHQNDGLSSEARQLVQHLDSSLRSAEDLISDLLDISRLE 861

Query: 381  VDQATDESRLFKVRDYLEEI-----LLSLQPRLKRTPHTMTLECPDDLAMYGPPGALFRV 435
              +   + + F + +  + +      L+ +  L+       L    D+ +      L R+
Sbjct: 862  NGKINPQRQPFVLNELFDTLGAEFKALAQEQGLRFRLRGSRLRVDSDIKL------LRRI 915

Query: 436  ITNLVINSLMHGLEEGATAPPGHMVLRVGHEKDTDCVVFRYHDTGRGIPEKNLKRIFDPF 495
            + N + N+  +          G ++L V   K   C+     D G GIP    K IF+ F
Sbjct: 916  LQNFLTNAFRYA--------DGPVLLGVRRRKGELCL--EVWDRGPGIPLDKQKVIFEEF 965

Query: 496  ----FTTRRGEGGTGLGLHIVYNLVTQTLGGSLAVHSPPGQGAIFLIRVP 541
                    R E G GLGL I   L  + LG  L+V S PG+G++F +RVP
Sbjct: 966  KRLDSHQTRAEKGLGLGLAIADGL-CRVLGHRLSVRSWPGKGSVFSVRVP 1014



 Score = 63.9 bits (154), Expect = 3e-14
 Identities = 41/129 (31%), Positives = 62/129 (48%), Gaps = 4/129 (3%)

Query: 43  IEHMDQGVLVADAKTRVIAWNRRACELLGVSADFLASGPTHVEVLGEMIRTGALVTAEID 102
           IE++ QG+ V D   +++AWNRR  EL       ++ G    +++      G     E +
Sbjct: 642 IENITQGISVVDQSLKLVAWNRRYLELFNYPDGLISVGRPIADIIRYNAERGLCGPGEAE 701

Query: 103 PVSTLIAAWLDLPEGERRPLIYERGNPTGLRIEVRTSPLPEGGYVRTFTDITQRKAAEQA 162
                   W+     + R    ER  P G  IE+  +P+P GG+V +FTDIT  + AEQA
Sbjct: 702 VHVARRLHWMR----QGRAHTSERLFPNGRVIELIGNPMPGGGFVMSFTDITAFREAEQA 757

Query: 163 LAEKTRLLD 171
           L E    L+
Sbjct: 758 LTEANEGLE 766