Pairwise Alignments

Query, 550 a.a., PAS/PAC Sensor Signal Transduction Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H

Subject, 467 a.a., putative sensor histidine kinase/response regulator from Pseudomonas putida KT2440

 Score =  106 bits (264), Expect = 2e-27
 Identities = 86/286 (30%), Positives = 132/286 (46%), Gaps = 43/286 (15%)

Query: 282 DITEGKRAQDALLVSEKMASLGQLVAGIAHEINTPIGTGVTAASLLAEKTQSLVQAVEA- 340
           +I E K+ +  L+ SEK+ASLGQ+ AG+AHEIN PIG   +    L    Q LV  ++A 
Sbjct: 192 EIEERKQLESQLVQSEKLASLGQMAAGVAHEINNPIGFVSSNLGTLGGYFQQLVAMLDAY 251

Query: 341 -------------GALRRSQLDAYLHVARESSRFIL----SNLTRAAELIQSFKQVAVDQ 383
                        G L+R +    L    E    ++      + R A +++  K  +   
Sbjct: 252 REAELMLGANETTGRLQRLREQTELEFLMEDIPILIKESKDGIGRVAHIVKDLKDFSRVD 311

Query: 384 ATDESRLFKVRDYLEEILLSLQPRLKRTPHTMTLECPDDLAMYGP-------PGALFRVI 436
           +  + +L  ++  ++  L  +   LK           D +  Y P       P  + +VI
Sbjct: 312 SAQQWQLADLQQGIDSTLNIVASELKHK--------ADLVKRYQPLPPVECLPSQINQVI 363

Query: 437 TNLVINSLMHGLEEGATAPP-GHMVLRVGHEKDTDCVVFRYHDTGRGIPEKNLKRIFDPF 495
            NLV+N+        A  P  G + L   H+    C+     DTG GI  +N+K+IFDPF
Sbjct: 364 MNLVLNAAQ------AMGPERGTITLGTAHQGAWVCI--EVADTGAGIAPENIKKIFDPF 415

Query: 496 FTTRRGEGGTGLGLHIVYNLVTQTLGGSLAVHSPPGQGAIFLIRVP 541
           FTT+    GTGLGL + Y +V +  GG + V S  G G  F +++P
Sbjct: 416 FTTKPVGQGTGLGLSLSYGIVKKH-GGEITVSSQVGVGTTFRVQLP 460