Pairwise Alignments

Query, 565 a.a., chemotaxis sensory transducer (NCBI) from Rhodospirillum rubrum S1H

Subject, 621 a.a., methyl-accepting chemotaxis protein from Magnetospirillum magneticum AMB-1

 Score =  249 bits (637), Expect = 2e-70
 Identities = 157/372 (42%), Positives = 227/372 (61%), Gaps = 14/372 (3%)

Query: 199 LVAALILGGVGLIIARGITKPLKTVVEGLDGLADRDYRRSLDIPA----SRSEVGRIASA 254
           LV A+ L  +G+++  G+ +     V  L G+  R    S D+       R EVG +A A
Sbjct: 192 LVLAIFLA-LGVVVTLGMARLTARPVTQLTGIMGRLAEGSTDVEIPSQDGRDEVGEMARA 250

Query: 255 FERLRGLLLEAAE----ERRQNAERTEQAALARKEEMLALASRFENQIGDLVNGLGSASE 310
               R  +  AA+    +RRQ  ++TE   LAR++ M+A    F   +  ++  + S+ E
Sbjct: 251 VAVFRDGMKRAADLESQQRRQREQQTE--LLARRDRMIA---EFNGAMEKIMATVSSSIE 305

Query: 311 ALRVSASTMSSGAEETLSQASTVTAAASESSENTQTVAAATEELASSIQEISRQASHSNA 370
            +   +S++ S AE+T +Q S V  AA  S+ N  TVA+A E+L SS+QEISR+ + +  
Sbjct: 306 RVHTLSSSLQSTAEQTSAQGSAVAGAAEHSAANVATVASAAEQLGSSVQEISRRVTETAT 365

Query: 371 MARTAVERVDETNKTVAALNSAALRVGDVVALITDIASQTNLLALNATIEAARAGEAGKG 430
           +   AV  +   N T+  L  AA R+G+VV LI DIA QTNLLALNATIEAARAGEAGKG
Sbjct: 366 ITSEAVSGIHTANTTMDGLAEAARRIGEVVQLINDIAGQTNLLALNATIEAARAGEAGKG 425

Query: 431 FAVVAGEVKSLAQQTAKATEDISRQIEDIQSVTTSTVQAISAIGESINGLSEVAGMIAAA 490
           FAVVA EVK+LA QTA+AT++I++QI  IQS++   VQ I  +G +I+ ++EV   IAAA
Sbjct: 426 FAVVASEVKTLANQTARATDEIAQQIAGIQSISQEAVQTIRNVGTTIDRVNEVVSSIAAA 485

Query: 491 VEEQNAATKEISMNIQRAEGASREVSGAISLVSEAARSGGETAADVLGAAEDLFHRNKEL 550
           VEEQ+AAT EI  ++Q A   + E++  I+ VS+AA + GE A+ +  AA++L      L
Sbjct: 486 VEEQSAATDEIVRSVQEASSGNAEITRNIADVSKAATATGEMASGMFKAADELVEEAGHL 545

Query: 551 NTAVSDFVSYIR 562
            + VS F+  +R
Sbjct: 546 RSEVSGFLGNMR 557