Pairwise Alignments

Query, 1301 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) and Response Regulator Receiver modulation (NCBI) from Rhodospirillum rubrum S1H

Subject, 1276 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score =  450 bits (1158), Expect = e-130
 Identities = 262/691 (37%), Positives = 388/691 (56%), Gaps = 18/691 (2%)

Query: 622  LRESEARFRATFEQAAVGIAHLDPDGHWLRVNHKLCDIVGYPPDELLTLSFQDIT-HPDD 680
            LR+SE R+R   E  +  I   D       V+  +  ++GY  D +    +Q I  +P  
Sbjct: 575  LRDSEQRYRMLAESISDVIFSTDNQLKLNYVSPSVQSVLGYQADWIFANGWQSIVANPAQ 634

Query: 681  LRADLRQME------------ALLAGQIDTYTIEKRYIRKTGESLWINLTVSLVRDIHNA 728
            L      ME            A L  Q+ T       +R  G  + I L + LV D    
Sbjct: 635  LTGIYSLMERVSKAMGDPAQMAQLCSQLPTQLFLFDCLRADGRKIPIELRLVLVWDDDQR 694

Query: 729  PAYFISVVENIQSRKEAELQLLLASAVFSNSMEGIFVTDLKGSILAVNPAFSQITLYEAA 788
                + V  +I  ++ AE  L +A+ VF +S   I +TD  G I+  N AFS+++ Y  +
Sbjct: 695  FEGVLGVGRDISQQRRAEKDLRMAATVFEHSTSAILITDPAGYIVQANEAFSRVSGYAVS 754

Query: 789  EVLGRNARILQSGRQNREFYVALWQDVLTIGSWRGEIWNRRRDGEVFPEWLSISSVRNHQ 848
            EVL +   +L    Q       + + +   GSW GE+W +RRDG+ +P W+ I++V + +
Sbjct: 755  EVLDQLPGMLTVDEQQEGHLRYVVKQLHQRGSWEGEVWLKRRDGDHYPAWVGITAVLDDE 814

Query: 849  GEVTNYIGIFSDLSRIKHSEAKFHHLAHHDPLTGLPNRLLLRSRLDHAIERARRTGGRCA 908
            G++ +Y+  F+D+S  K SE + H LA++D LT LPNR L + RL +A+++A R      
Sbjct: 815  GDLASYVCFFTDISERKASEQRIHRLAYYDALTHLPNRTLFQDRLYNALQQAERQKAWVV 874

Query: 909  VLFLDLDRFKMINDSLGHRAGDTLLRTLGARLTACLGDTGTLARLGGDEFVAVIEDID-- 966
            ++FLDLDRFK INDSLGH AGD +L+ +  RL AC+ D  T+AR+GGDEF  +++     
Sbjct: 875  LMFLDLDRFKPINDSLGHAAGDRMLKDMALRLLACVDDDDTVARMGGDEFTLLLQPRPTR 934

Query: 967  --GIPAVGTIALTMLERLREPCRLSEGPEVCIGGSVGISLFPEDGDNPDTLLQHADTALG 1024
               +     +A  +L  L  P  L E  E  +  S+GI+L P+DG     L+++ADTA+ 
Sbjct: 935  EMALNRAIHVAENILGSLVRPFVL-ENREFFVTASIGIALSPQDGSELSQLMKNADTAMY 993

Query: 1025 QVKGAGGGAYGFYTRTLTERISARLGLEAGLRHALEQGDFLLHYQPLIALGTGEVEGVEA 1084
              K  G   + FY   +      RL LE+ LRHA+EQ +F+L+YQP  +     + G EA
Sbjct: 994  HAKERGKNNFQFYQAEMNASALERLELESDLRHAMEQNEFILYYQPQFSGDGKRLTGAEA 1053

Query: 1085 LVRWAGGDGLLIPPDRFIPLAEDTGLIVPLGEWVLGEACRTMQRWRSQGMPLTVLAVNLS 1144
            L+RW      L+PP  FIP+ E+ GL+V +G+WVL EA R ++ W    + +  ++VN+S
Sbjct: 1054 LLRWRHPTRGLVPPGDFIPVIEELGLVVDVGDWVLREASRQLKAWHKAKVRVPKVSVNIS 1113

Query: 1145 PRQFRDHAIPALVRRVLEQTGLPASVLELEITESAIMEQGAAAEAQMTGLKHLGVRLAID 1204
             RQF D  +   +  +LE++GLP + LELE+TES +M +   A   +  LK+LG+ +A+D
Sbjct: 1114 ARQFSDGQLGTRIANILEESGLPPACLELELTESILMREVNEALQILASLKNLGLSIAVD 1173

Query: 1205 DFGTGYSSLANLRRFPIDKIKIDQSFVRDIPRDAAAEEITATIIAMGRTLKLHVLAEGVE 1264
            DFGTGYSSL  L++FPID +KID++FV  +P      +I   IIAM  +L L V+AEGVE
Sbjct: 1174 DFGTGYSSLNYLKQFPIDVLKIDRTFVDGLPEGEQDAQIARAIIAMAHSLNLAVIAEGVE 1233

Query: 1265 TTDQLDFLSRKQCDSAQGYLFSRPITAAALE 1295
            T +QL+FL    CD  QGYLF RP+ A   E
Sbjct: 1234 THEQLEFLREHGCDEVQGYLFGRPMPAHQFE 1264