Pairwise Alignments

Query, 315 a.a., RuBisCO transcriptional regulator cbbR, LysR family (NCBI) from Rhodospirillum rubrum S1H

Subject, 297 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  109 bits (272), Expect = 9e-29
 Identities = 91/296 (30%), Positives = 142/296 (47%), Gaps = 18/296 (6%)

Query: 6   LRQMQIFDAVARHLSFSNAARELGLTQPAVSLQIKQIEALAGLPLFEQMGRVLLLTQAGT 65
           LR ++ F AVA  L F  AA+ LG++QP +S QI+ +E   G  LFE+  R + L++AG 
Sbjct: 3   LRHLRYFIAVAEELHFGRAAQVLGISQPPLSQQIQALEQEVGARLFERTNRRVELSEAGR 62

Query: 66  ILLGHVRTILAAVTDADKAMDALKGKR---AGALRIGVVSTAKYFA--PRLLSVFTAGYP 120
           + L   R +LA V   DKA D  +  +    G L+IG  S+A + +  P+ +  F   +P
Sbjct: 63  LFLHEARLVLAQV---DKAADVARRAQLGELGELKIGFTSSAPFNSSIPQAIFAFRQAFP 119

Query: 121 GVELGLTVANREQILGMIQENALDLFIMGRPPTEPAVRAERFAPNPMVMVAASDHPLV-- 178
            V L L   +  ++   + + ++ + +M   P   ++        P+V V  + HPLV  
Sbjct: 120 AVHLNLQEMSSTEVAESLVDESIQVGLMRPLPLPDSLSVVELMREPLVAVMNAGHPLVAG 179

Query: 179 -RRKLTFHDLSGETFLM--REPGSGTRILMEKLMTDHGVLPHRMIEMSSNETIKQAVMAG 235
             R L    L+ E F+   R  GSG    +  L  D G  PH   E     TI   V AG
Sbjct: 180 SERGLHLAQLAEEPFVFFPRSYGSGLYAQLLSLCRDAGFSPHFAQEAGEAMTIIGLVAAG 239

Query: 236 MGISLLSRNTMSLEL-SVGRLVILDVEGLPIQRDWYVVIREGKHLLPVAEAMVAFL 290
           +G+S+L  +   + +  V    +LD E +      ++V R+G    P+A A V  L
Sbjct: 240 LGVSVLPASYQRIRIDGVVYRTLLDPEAV---TSVWLVQRKGAQ-TPMAAAFVELL 291