Pairwise Alignments

Query, 315 a.a., RuBisCO transcriptional regulator cbbR, LysR family (NCBI) from Rhodospirillum rubrum S1H

Subject, 320 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score =  210 bits (535), Expect = 3e-59
 Identities = 125/299 (41%), Positives = 174/299 (58%), Gaps = 3/299 (1%)

Query: 5   TLRQMQIFDAVARHLSFSNAARELGLTQPAVSLQIKQIEALAGLPLFEQMGRVLLLTQAG 64
           TLRQ+QIF+ V    S+S AA E+ LTQPAVSLQI+Q+E L G PLFE +G+ L LT+A 
Sbjct: 9   TLRQLQIFNEVCDLRSYSRAAEEMALTQPAVSLQIRQLEELIGQPLFEYVGKKLYLTEAA 68

Query: 65  TILLGHVRTILAAVTDADKAMDALKGKRAGALRIGVVSTAKYFAPRLLSVFTAGYPGVEL 124
             L      I   +   D  +  ++G   G L++ + S+AKYF P L + F   +P V L
Sbjct: 69  EALQRASHDIFGRLESLDMQLSDMQGSLQGQLKLAIESSAKYFVPHLFAAFKQRHPEVNL 128

Query: 125 GLTVANREQILGMIQENALDLFIMGRPPTEPAVRAERFAPNPMVMVAASDHPLVR-RKLT 183
            LTV NR Q +  + +N  DL IM   P +  +    F  NP+V VA   HPL +  +L 
Sbjct: 129 TLTVVNRAQAIRRLSDNRDDLIIMSMVPQDMGLEFLPFLNNPIVAVAPPQHPLCKLEQLR 188

Query: 184 FHDLSGETFLMREPGSGTRILMEKLMTDHGVLPHRMIEMSSNETIKQAVMAGMGISLLSR 243
             DL   T L+RE GSGTR   E+   D  V   + +E++S +  ++ V+AG+GI+LL+R
Sbjct: 189 MQDLEPHTLLVREQGSGTRKACEEYFKDKRVHFAQTLEVASADAQRECVIAGLGIALLTR 248

Query: 244 NTMSLELSVGRLVILDVEGLPIQRDWYVVIREGKHLLPVAEAMVAFLKARGEDLLSDAI 302
           + ++LEL+ G L  L VE LP+ R W VV  + K   PVA A +AF+  RGE  L  A+
Sbjct: 249 HAVNLELATGMLKELPVEELPLYRSWCVVQAKAKRQSPVALAFLAFI--RGERALISAL 305