Pairwise Alignments

Query, 179 a.a., Sigma-24 (FecI) (NCBI) from Rhodospirillum rubrum S1H

Subject, 178 a.a., RNA polymerase sigma factor RpoE from Variovorax sp. SCN45

 Score = 65.5 bits (158), Expect = 5e-16
 Identities = 44/150 (29%), Positives = 68/150 (45%), Gaps = 9/150 (6%)

Query: 26  VGDSMRAEDVVQEAWLRFDSASPSPTSTEAGRGTALERPVGYLYKIVRNLAVDLSRRLKR 85
           +G+S +A D +Q+ WLR +S               +  P  YL ++  NLA D   +  R
Sbjct: 28  LGNSDQASDALQDTWLRLESRDDID---------GVRDPASYLLRVAVNLAYDQLGKQGR 78

Query: 86  EAWMGDGGASLDGVAAGAPSPEQEAIGRDDLRAVAQALASLPPRTRTAFDLHRFENCTFA 145
            A   +  A L+     AP P Q A  R ++ A+A  +A +PPR R    + R+E+    
Sbjct: 79  LATPEEIDALLEDAPDPAPGPSQIAEDRSEMAALAALIARMPPRRRQVLVMVRWEHLPQR 138

Query: 146 EIGQRLGISQTRAHSLVHEALAHCLDHLDR 175
           E+  RLGIS       + +A   C   + R
Sbjct: 139 EVAARLGISLRTVEKELKDAHDFCAARMGR 168