Pairwise Alignments

Query, 179 a.a., Sigma-24 (FecI) (NCBI) from Rhodospirillum rubrum S1H

Subject, 169 a.a., KEGG: RNA polymerase sigma-70 factor, ECF subfamily from Variovorax sp. SCN45

 Score = 62.8 bits (151), Expect = 3e-15
 Identities = 48/162 (29%), Positives = 74/162 (45%), Gaps = 11/162 (6%)

Query: 10  LFLRHRRALIDYATPIVGDSMRAEDVVQEAWLRFDSASPSPTSTEAGRGTALERPVGYLY 69
           L+  H   L+D     +G+   A D+ Q+ ++R  S      S EAG    L  P  YL 
Sbjct: 14  LYSDHHPWLLDMLRRKLGNLDNAADLAQDTFVRILS------SNEAG---PLREPRAYLT 64

Query: 70  KIVRNLAVDLSRRLKREAWMGDGGASLDGVAAGAPSPEQEAIGRDDLRAVAQALASLPPR 129
            +   +A    RRL  E    +  A L    A APSPE   +  + L AV++ L  L P 
Sbjct: 65  TVASRIAAQYFRRLALERTYLEAIAHLP--EASAPSPETRLLVVEALAAVSRVLDGLKPH 122

Query: 130 TRTAFDLHRFENCTFAEIGQRLGISQTRAHSLVHEALAHCLD 171
            R  F + + +  T+++I Q+LG++       + +A  HC D
Sbjct: 123 VREIFLMAQLDGLTYSQIAQQLGVTINVVQKAMLKAYRHCYD 164