Pairwise Alignments

Query, 179 a.a., Sigma-24 (FecI) (NCBI) from Rhodospirillum rubrum S1H

Subject, 158 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

 Score = 55.8 bits (133), Expect = 3e-13
 Identities = 48/156 (30%), Positives = 71/156 (45%), Gaps = 14/156 (8%)

Query: 16  RALIDYATPIVGDSMRAEDVVQEAWLRFDSASPSPTSTEAGRGTALERPVGYLYKIVRNL 75
           R L+ + +  +G    AEDV  +A+LR           E      +E P  +LY+   NL
Sbjct: 6   RELVSFLSARLGSRQAAEDVAHDAYLRV---------LERTGSEQIEHPRAFLYRTALNL 56

Query: 76  AVDLSRR-LKREAWMGDGGASLDGVAAGAPSPEQEAIGRDDLRAVAQ-ALASLPPRTRTA 133
            VD  RR L R+A   D   +LD  +    S  Q  +  D   A+ Q AL  L    R +
Sbjct: 57  VVDRHRRQLVRQAEPLD---ALDADSRLHSSELQHDLQLDQRLALMQKALDELSRPCRDS 113

Query: 134 FDLHRFENCTFAEIGQRLGISQTRAHSLVHEALAHC 169
           F L + E  +  +I +RLGIS++     +  A+ HC
Sbjct: 114 FLLRKIEGLSHQQIAERLGISRSLVEKHIVNAMKHC 149