Pairwise Alignments

Query, 179 a.a., Sigma-24 (FecI) (NCBI) from Rhodospirillum rubrum S1H

Subject, 170 a.a., RNA polymerase, sigma 19 factor from Pseudomonas putida KT2440

 Score = 61.2 bits (147), Expect = 9e-15
 Identities = 49/161 (30%), Positives = 73/161 (45%), Gaps = 10/161 (6%)

Query: 10  LFLRHRRALIDYATPIVGDSMRAEDVVQEAWLRFDSASPSPTSTEAGRGTALERPVGYLY 69
           L+  HR  L  +    +G++  A D+ Q+ +LR   AS  P +        +  P  YL 
Sbjct: 15  LYREHRGWLEAWLRRRMGNAWDAADLSQDTFLRI-LASAQPLAD-------IREPRAYLL 66

Query: 70  KIVRNLAVDLSRRLKREAWMGDGGASLDGVAAGAPSPEQEAIGRDDLRAVAQALASLPPR 129
            + + L  +  +R   E    D  A L       PSPEQ  +  + L+A+ + L  L P 
Sbjct: 67  TVGKRLLSNFHQRRSLEQAYLDALAQLP--EQHVPSPEQRWVLLETLQALDELLDGLKPA 124

Query: 130 TRTAFDLHRFENCTFAEIGQRLGISQTRAHSLVHEALAHCL 170
            R AF   + E   +AEIGQRLG+ Q      + +A  HCL
Sbjct: 125 IRKAFLWSQLEGLGYAEIGQRLGVCQRSVKRYMAQAYEHCL 165