Pairwise Alignments

Query, 179 a.a., Sigma-24 (FecI) (NCBI) from Rhodospirillum rubrum S1H

Subject, 374 a.a., putative RNA polymerase sigma-70 factor, ECF subfamily/transmembrane sensor protein from Pseudomonas putida KT2440

 Score = 83.2 bits (204), Expect = 5e-21
 Identities = 51/166 (30%), Positives = 79/166 (47%), Gaps = 8/166 (4%)

Query: 11  FLRHRRALIDYATPIVGDSMRAEDVVQEAWLRFDSASPSPTSTEAGRGTALERPVGYLYK 70
           F  H   L+ + T  + D  RA DV QE +L+  +           R         ++++
Sbjct: 13  FQEHYDDLLQFLTRRMSDRQRAADVAQETYLKLVNIDEQAVPVLHARS--------FIFR 64

Query: 71  IVRNLAVDLSRRLKREAWMGDGGASLDGVAAGAPSPEQEAIGRDDLRAVAQALASLPPRT 130
           +  NLA+D  RR +R A   D       VA  AP+PE   + R+ L+ + QAL  LP   
Sbjct: 65  VAGNLAIDALRREQRIAASHDDSDGACEVACPAPAPEAALLARERLQILDQALLQLPDNA 124

Query: 131 RTAFDLHRFENCTFAEIGQRLGISQTRAHSLVHEALAHCLDHLDRS 176
           R A  L+R E  T  ++ QRLG+S++     + +AL HC   L ++
Sbjct: 125 RQALLLNRVEGLTQKQVAQRLGVSESMVAKYIGQALRHCRGRLKQA 170