Pairwise Alignments

Query, 179 a.a., Sigma-24 (FecI) (NCBI) from Rhodospirillum rubrum S1H

Subject, 170 a.a., RNA polymerase subunit sigma-24 from Pseudomonas putida KT2440

 Score = 54.3 bits (129), Expect = 1e-12
 Identities = 48/173 (27%), Positives = 79/173 (45%), Gaps = 20/173 (11%)

Query: 10  LFLRHRRALIDYATPIVGDSMRAEDVVQEAWLRFDSASPSPTSTEAGRGTALERPV---- 65
           +FL  R  L+     +VG+   AED++QE +LR   A               ERP+    
Sbjct: 9   VFLVQRLTLLRTLQRMVGNPSTAEDLLQETYLRVSRALG-------------ERPIEHIE 55

Query: 66  GYLYKIVRNLAVD--LSRRLKREAWMGD-GGASLDGVAAGAPSPEQEAIGRDDLRAVAQA 122
            ++++  RNLA+D   +RR++    + D     L  VAA A S E  A     L+ ++ +
Sbjct: 56  PFVFQTARNLALDHLRARRVQARMLVDDVPDEVLHSVAAPATSSEDAAHAEQLLKHLSVS 115

Query: 123 LASLPPRTRTAFDLHRFENCTFAEIGQRLGISQTRAHSLVHEALAHCLDHLDR 175
           L  L  R +  F L R    T+ EI ++L +S +     +   +A C+   +R
Sbjct: 116 LNQLSERQQRIFILSRLHGATYLEIAEQLSVSPSTVQKELKLIMAICMGVAER 168