Pairwise Alignments

Query, 179 a.a., Sigma-24 (FecI) (NCBI) from Rhodospirillum rubrum S1H

Subject, 171 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

 Score = 63.2 bits (152), Expect = 2e-15
 Identities = 48/160 (30%), Positives = 72/160 (45%), Gaps = 11/160 (6%)

Query: 10  LFLRHRRALIDYATPIVGDSMRAEDVVQEAWLRFDSASPSPTSTEAGRGTALERPVGYLY 69
           L+  H   L  +    VG S  A D+ Q+ ++R            A + + L+ P  YL 
Sbjct: 15  LYQSHHTWLRGWLRSRVGCSEHAADLAQDTFVRL---------LRARQMSPLKEPRAYLS 65

Query: 70  KIVRNLAVDLSRRLKREAWMGDGGASLDGVAAGAPSPEQEAIGRDDLRAVAQALASLPPR 129
            I R L +D  RR   E    +G A L    A  PS E + +  D L  + +AL  L PR
Sbjct: 66  SIARGLMIDQFRRRALERAYQEGLAHLP--EAEVPSEEDKLVILDSLERLDRALQQLKPR 123

Query: 130 TRTAFDLHRFENCTFAEIGQRLGISQTRAHSLVHEALAHC 169
            R AF L + +  +  ++ QRLG+S+      + +AL  C
Sbjct: 124 VRQAFLLAQLDGLSIVQVAQRLGVSRATVERDLAKALGAC 163