Pairwise Alignments

Query, 179 a.a., Sigma-24 (FecI) (NCBI) from Rhodospirillum rubrum S1H

Subject, 172 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

 Score = 55.8 bits (133), Expect = 4e-13
 Identities = 43/161 (26%), Positives = 72/161 (44%), Gaps = 13/161 (8%)

Query: 10  LFLRHRRALIDYATPIVGDSMRAEDVVQEAWLRFDSASPSPTSTEAGRGTALERPVGYLY 69
           L+  HR  L+ +    +    RAED+ Q+ ++R        T  E         P  +L 
Sbjct: 15  LYRDHRGWLLAWLQRSMACRQRAEDLSQDTFVRLLGREQLDTPRE---------PRAFLA 65

Query: 70  KIVRNLAVDLSRRLKRE-AWMGDGGASLDGVAAGAPSPEQEAIGRDDLRAVAQALASLPP 128
            + + L  D  RR   E A++ +     +   A  PSPE + +  +DL+A+ + L  L  
Sbjct: 66  AVAKGLMFDHFRRAALEQAYLAELALIPE---AEQPSPEMQHLILEDLKAIDRLLGKLSS 122

Query: 129 RTRTAFDLHRFENCTFAEIGQRLGISQTRAHSLVHEALAHC 169
           + R AF   R +    AEI +RLG+S +R    + + +  C
Sbjct: 123 KARAAFLHSRLDGMGHAEIAERLGVSVSRVRQYIAQGMRQC 163