Pairwise Alignments

Query, 179 a.a., Sigma-24 (FecI) (NCBI) from Rhodospirillum rubrum S1H

Subject, 173 a.a., KpLE2 phage-like element; RNA polymerase, sigma 19 factor (NCBI) from Escherichia coli BW25113

 Score = 58.5 bits (140), Expect = 6e-14
 Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 19/165 (11%)

Query: 10  LFLRHRRALIDYATPIVGDSMRAEDVVQEAWLRFDSASPSPTSTEAGRGTALERPVGYLY 69
           L+  H   L  + T  +  +  A+D+ Q+ +LR   +    T         +  P  +L 
Sbjct: 16  LYGTHHGWLKSWLTRKLQSAFDADDIAQDTFLRVMVSETLST---------IRDPRSFLC 66

Query: 70  KIVRNLAVDLSRRLKREAWMGDGGASLDGVA----AGAPSPEQEAIGRDDLRAVAQALAS 125
            I + + VDL RR   E       A L+ +A     GAPSPE+     + L+ +   L  
Sbjct: 67  TIAKRVMVDLFRRNALEK------AYLEMLALMPEGGAPSPEERESQLETLQLLDSMLDG 120

Query: 126 LPPRTRTAFDLHRFENCTFAEIGQRLGISQTRAHSLVHEALAHCL 170
           L  +TR AF L + +  T++EI  +LG+S +     V +A+ HCL
Sbjct: 121 LNGKTREAFLLSQLDGLTYSEIAHKLGVSISSVKKYVAKAVEHCL 165