Pairwise Alignments

Query, 179 a.a., Sigma-24 (FecI) (NCBI) from Rhodospirillum rubrum S1H

Subject, 169 a.a., ECF family RNA polymerase sigma factor from Agrobacterium fabrum C58

 Score = 65.1 bits (157), Expect = 6e-16
 Identities = 47/164 (28%), Positives = 71/164 (43%), Gaps = 11/164 (6%)

Query: 11  FLRHRRALIDYATPIVGDSMRAEDVVQEAWLRFDSASPSPTSTEAGRGTALERPVGYLYK 70
           F R+ R +  Y          ++D+ QEAW++                 AL  PV YL +
Sbjct: 12  FSRNERRIKRYLISRTRSQADSDDLAQEAWIKL----------ARNGAAALAAPVPYLMR 61

Query: 71  IVRNLAVDLSRRLKREAWMGDGGASLDGVAAGAPSPEQEAIGRDDLRAVAQALASLPPRT 130
           I R+LAVD  R  KR+    D    L  VA   P PE++   RD +R + + +  LP R 
Sbjct: 62  IARSLAVDHDRGQKRKLTSNDIDV-LMSVADEQPGPEKQFEDRDQVRCLIEIIDELPERQ 120

Query: 131 RTAFDLHRFENCTFAEIGQRLGISQTRAHSLVHEALAHCLDHLD 174
           R      R +    A+I    G+S       V +A+ +C + L+
Sbjct: 121 RKMLVACRLDQRRHADIAAEFGVSIRTVELEVRKAVDYCRERLE 164