Pairwise Alignments

Query, 179 a.a., Sigma-24 (FecI) (NCBI) from Rhodospirillum rubrum S1H

Subject, 166 a.a., sigma factor from Agrobacterium fabrum C58

 Score = 91.3 bits (225), Expect = 8e-24
 Identities = 56/153 (36%), Positives = 84/153 (54%), Gaps = 12/153 (7%)

Query: 11  FLRHRRALIDYATPIVGDSMRAEDVVQEAWLRF-DSASPSPTSTEAGRGTALERPVGYLY 69
           ++ HR  LI YAT I+G    AEDVVQEA+L+F    S +PT+ ++           YL+
Sbjct: 13  YVAHRVDLIKYATLILGSRADAEDVVQEAFLKFVPEGSGNPTNLKS-----------YLF 61

Query: 70  KIVRNLAVDLSRRLKREAWMGDGGASLDGVAAGAPSPEQEAIGRDDLRAVAQALASLPPR 129
           +IVRNLA+D  RR +++           G+     +PE+ A+  D++R +   LA LP +
Sbjct: 62  RIVRNLALDNRRRSRQDLRERPDDTPFWGMPQDNGTPEEHALFCDEVRQMQTILAGLPVQ 121

Query: 130 TRTAFDLHRFENCTFAEIGQRLGISQTRAHSLV 162
            R A ++HRF      EI + LG+S   AH L+
Sbjct: 122 ARVALEMHRFGGYNMEEIARHLGVSVAGAHRLI 154