Pairwise Alignments

Query, 393 a.a., PepSY-associated TM helix (NCBI) from Rhodospirillum rubrum S1H

Subject, 525 a.a., conserved protein of unknown function containing PepSY-associated TM helix domain from Pseudomonas putida KT2440

 Score = 65.5 bits (158), Expect = 3e-15
 Identities = 98/376 (26%), Positives = 154/376 (40%), Gaps = 50/376 (13%)

Query: 17  VHSWMGLPLWAYVFFLCFTGTLASVSHEIMWLIDPEVRAGASGDPAPASALIAAAEAAAP 76
           +H+W GL     +F +  TGTL+    EI     PEVR+ A  DP  +   +A A+    
Sbjct: 12  LHTWTGLIFGWLLFAIFLTGTLSYFKEEITHWSQPEVRSHAL-DPINS---LAVAQRYLQ 67

Query: 77  GSRALSVGWGADYMAATVRLGLE-NGLYAMAYVDPVSATLRG-----IGSDNPLPV---- 126
            +   S  W        +R+  E     ++ Y DP S   RG     + +    PV    
Sbjct: 68  DNAGHSSTW-------FIRMPNEREAALSVGYRDP-SGGPRGFVRKTLDTQTGQPVEARD 119

Query: 127 -----FLRALHGWLLSPWTGGYPWGWYLVAVMAIPLLGSVVTGMVVYKRFWRAFFTRPKL 181
                F    H  L  P    YP G +L    A  +L  +VTG++ +K+ ++ FFT    
Sbjct: 120 SRGGEFFYRFHFQLQMP----YPVGRWLSTFCAFIMLLGLVTGIITHKKIFKEFFT---F 172

Query: 182 RTGKGARVLLGDLHRLGGAWSLWFVLLIGVTGL----WFLVQAAIVDLRGALDPGAPLVV 237
           R GKG R  L D H   G   L F L+I  + L    + ++ A I+   G         +
Sbjct: 173 RPGKGQRSWL-DGHNAIGVLVLPFHLMISYSSLVLFMYMVMPAGIMASYGNDTDKYFNDL 231

Query: 238 IDRADLPKRAPGEHPPPAEVDAALAAAQATHAGGRVTALYF--PG--TAFDPIYAYGSGR 293
             R D PK A    P  A + +  A  Q    G RV  +    PG   A        +  
Sbjct: 232 FGRNDAPKAAQVATPLVA-LPSLYAKVQELQPGARVGNIQVQNPGDSNARVTFTQSAADH 290

Query: 294 VPLLSDVTYVHPRTAEVLYSKKGGDSGPLGLASQILRPLHVGDFGGPGALGLAIKGVWFL 353
           V       +     +  L S+   +SG + + +     LH+G+F GP      ++ ++F 
Sbjct: 291 VAYRRSANWTFDGASGALLSQGKPESGVM-MTAFSFAGLHMGNFAGPW-----LRWLYFF 344

Query: 354 FGLILSMLIFSGMLIW 369
           FG+  + +I +G+++W
Sbjct: 345 FGVAGTAVIGTGLVMW 360