Pairwise Alignments

Query, 296 a.a., ABC-3 transporter component (NCBI) from Rhodospirillum rubrum S1H

Subject, 262 a.a., membrane protein from Pseudomonas simiae WCS417

 Score =  132 bits (331), Expect = 1e-35
 Identities = 92/257 (35%), Positives = 144/257 (56%), Gaps = 9/257 (3%)

Query: 27  FLVNALIAALIAGPVLGGLGTLVVTKRLAFFSEAVGHAALTGVAIGILLGEPYTGPYASL 86
           FL+ AL+A L    V G LG+ VV +R+A+F + + HAAL GVA+G LL      P  ++
Sbjct: 4   FLLYALLAGLALALVAGPLGSFVVWRRMAYFGDTLSHAALLGVAMGFLLD---VSPTIAV 60

Query: 87  FGYCLLFALLVAFLRNRTGLATETLIGVFLSVSLALGASLLLMLSTRVNVHI-LENVLFG 145
              CLL A+L+  L+ R  LA++TL+G+    +L+LG   L++LS    V I L   LFG
Sbjct: 61  TVGCLLLAVLLVTLQQRQPLASDTLLGILAPSTLSLG---LVVLSFMHEVRIDLMAYLFG 117

Query: 146 SVLTVDDRDLGVLLVVGLGVSVVGLPLFNRLMLGGFNPALAQVRGVRVVFLDYLFLMLVT 205
            +L +   DL  +L     V V+ + L+  L+    +  LA V G+ V  L    ++L+ 
Sbjct: 118 DLLAISTTDLAWILGGSAAVLVLLVALWRPLLAITVHEELATVEGLPVPSLRMALMLLIA 177

Query: 206 VVTVASVKIIGAILVGALLVIPAAAARVAARSLRGFFLLSIVFATLSAVAGILIPVHFDL 265
           VV   ++KI+G +L+ +LL+IPAAAA+  ARS     + + +   L+   G+ +    D 
Sbjct: 178 VVIAVAMKIVGVLLITSLLIIPAAAAQRHARSPEQMAIGASLLGMLAVCGGLALSWFKD- 236

Query: 266 PIPSGGAIILAAGLLFL 282
             P+G +I++ A  LFL
Sbjct: 237 -TPAGPSIVVTAAALFL 252