Pairwise Alignments

Query, 392 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

Subject, 282 a.a., glycine betaine ABC transporter (permease) from Pseudomonas putida KT2440

 Score =  105 bits (261), Expect = 2e-27
 Identities = 82/254 (32%), Positives = 120/254 (47%), Gaps = 41/254 (16%)

Query: 111 FWLLVLACLLLGTDALVRLRPGPLARLLALGALFGALGLLLASGQWDGVSVLKEYANRAD 170
           +WLL+L   LL   A   L     A L+AL AL G LGL                     
Sbjct: 55  WWLLLLLVGLLAWHASRSLLRS--AVLVALLALIGMLGL--------------------- 91

Query: 171 AFWREARTHLALALGAVAVACAVGLPLGVLCHRVAWLRGMVLQGLTIIQTIPSIALFGIL 230
             W +    LAL L +  +   VG+PLG+L       R ++L  L ++QT+P        
Sbjct: 92  --WDKLLQTLALVLVSTGLCVLVGVPLGILLAARPLARRLLLPVLDVMQTLP-------- 141

Query: 231 MAPLGWLAAHVPAIAALGVRGIGATPALVALILYALLPVVANTVVGLAQVPAATVDAARG 290
                   A V  I  L + G+G  PA+ A ++YAL P+V  T +GL+Q+  + + AA G
Sbjct: 142 --------AFVYLIPVLMLFGLGKVPAVFATLIYALPPLVRLTELGLSQIDPSLLQAAHG 193

Query: 291 MGMGRGRLLREVELPLALPVILTGVRIVLVQAIGLTTVAALIGGGGFGTFVFQGVGQAAM 350
           +G  R + LR + LPLALP I+ G+   ++ A+ +  VA++IG  G G  V  G+    +
Sbjct: 194 LGASRWQRLRRIALPLALPSIMAGLNQSVMMALSMVVVASMIGARGLGEDVLAGIQTLNV 253

Query: 351 DLVLLGALPTVALA 364
              +   L  VALA
Sbjct: 254 GQGMEAGLAIVALA 267