Pairwise Alignments

Query, 860 a.a., ATP-dependent helicase HrpB (NCBI) from Rhodospirillum rubrum S1H

Subject, 1301 a.a., ATP-dependent helicase HrpA from Pseudomonas putida KT2440

 Score =  248 bits (633), Expect = 2e-69
 Identities = 171/456 (37%), Positives = 242/456 (53%), Gaps = 30/456 (6%)

Query: 25  LPIDPVLPALLEALASHGRAVLIAPPGAGKTTRVPPALLGALWLGGQKVVM-LEPRRLAT 83
           LPI      + +ALA +   V+    G+GKTT++P   L  L  G   ++   +PRR+A 
Sbjct: 70  LPIAAKRDEIKKALAENQVLVIAGETGSGKTTQLPKICL-ELGRGSHGLIAHTQPRRIAA 128

Query: 84  RAAARRMAFEAGEAVGQRFGFRVRGESRSGPLTRVEVMTEGILTRRIQDDPELAGVGCVI 143
           R+ A R+A E G  +G   G++VR E +S   T V++MT+GIL    Q D  L     +I
Sbjct: 129 RSVAARVAEELGTPLGALVGYQVRFEDQSDSNTLVKLMTDGILLAETQHDRFLERYDTII 188

Query: 144 LDEFHERGLQGDLAFALLREIQGALRPDLRLLVMSATLDGAAIAALMDDAPVIESHGRAF 203
           +DE HER L  D     L+ +    RPDL+L++ SAT+D    +   D AP+IE  GR F
Sbjct: 189 VDEAHERSLNIDFLLGYLKTLLHR-RPDLKLIITSATIDLERFSRHFDGAPIIEVSGRTF 247

Query: 204 PVTITHGERPAARD-----------LGPAMARTILRALEDE------PGSVLAFLPGERE 246
           PV   +    + +D           +  A+  T+    + E      PG VL FLPGERE
Sbjct: 248 PVDTWYRPLTSEQDEEGNQIEDDLTVDQAILATLDELAQHERSEGKGPGDVLIFLPGERE 307

Query: 247 IAAVAGALARALPADTVLRPLYGALPPAEQDAAISPCPPGQRKVVLATDIAETSLTIEGV 306
           I   A  L +A    T + PLY  L PAEQ     P     R+VVLAT++AETSLT+ G+
Sbjct: 308 IRDAAEILRKAQLRHTEILPLYARLSPAEQQRIFQPHTG--RRVVLATNVAETSLTVPGI 365

Query: 307 RIVVDSGLRRSPRFDPQTGLSRLDTVRISQAGAEQRRGRAGRLEPGVCLRLWPEAEHRAL 366
           R V+D+G  R  R+  +  + RL    +SQA A QR+GR GR+EPG+C+RL+ E +  + 
Sbjct: 366 RYVIDTGTARISRYSYRAKVQRLPIEAVSQASANQRKGRCGRVEPGICVRLYSEEDFNSR 425

Query: 367 PAQETPEILAADLAPLALEL--ARWGARDAAALCWPTPPPPGPLAQARDLLTSLGALEPA 424
           PA   PEIL  +LA + L++   R GA DA       PP    ++   +LL  L A+   
Sbjct: 426 PAFTDPEILRTNLAAVILQMLHLRLGAIDAFPFI--EPPDGKAISDGFNLLQELSAVNRE 483

Query: 425 GGLSAHGAAMAALPLHPRLAHMVLAAKADGADDGAL 460
             L+  G  +A LP+ PRL  M+L    +GA  G+L
Sbjct: 484 NQLTPIGRQLARLPIDPRLGRMLL----EGARLGSL 515