Pairwise Alignments

Query, 109 a.a., Hemimethylated DNA-binding region (NCBI) from Rhodospirillum rubrum S1H

Subject, 105 a.a., heat shock protein HspQ from Serratia liquefaciens MT49

 Score = 47.8 bits (112), Expect = 4e-11
 Identities = 29/95 (30%), Positives = 52/95 (54%), Gaps = 4/95 (4%)

Query: 3  MRVAKYRIGQVVRHRVYPFRGVIFDVDPVFNNTEEWYDAIPEDIRPARDQPFYHLLAEN- 61
          M  +K+ IGQ VRH++  + GV+ D+DP ++  +   D I  +    R  P+YH++ E+ 
Sbjct: 1  MIASKFGIGQQVRHKLLGYLGVVIDIDPEYSMEQPKADEIAAN-TDLRFAPWYHVVMEDE 59

Query: 62 -GESTYTAYVSEQNLLAEDNPRPVQHPELAEMFDA 95
           G+  +T Y++E  L  E      + P L E+ ++
Sbjct: 60 EGQPVHT-YLAEAQLDGEAQDAHPEQPSLDELAES 93