Pairwise Alignments

Query, 336 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

Subject, 343 a.a., Dipeptide transport system permease protein DppB from Xanthobacter sp. DMC5

 Score =  270 bits (691), Expect = 3e-77
 Identities = 140/328 (42%), Positives = 211/328 (64%), Gaps = 2/328 (0%)

Query: 7   RRVVLIIPAFIGVTLLAFALIHLIPGDPILVMAGERGVSPARHAMLMTQLGLDRPLWEQY 66
           + ++  +PA  GV L  F L+ ++PGDP    A       A  A +   +GLDRP+ EQ+
Sbjct: 13  KHLLASLPALFGVVLFTFLLMRVLPGDPAAFFASGPNAGQAEMAQIRETMGLDRPIPEQF 72

Query: 67  LTYLGKALQGDLGNSIVTRQPVIEEFKTLFPATIELGVFAMVFAVLIGIPAGMLAAVKRG 126
           + Y+G   +G+LG S+ T QPVI +     PA++EL VFA+V A+ + +P G+LAA++  
Sbjct: 73  VRYVGDLARGNLGQSMTTGQPVIADLAERMPASLELTVFALVLALALALPLGILAALRPN 132

Query: 127 TSLDHGVMVVSLTGYSMPIFWWGLLLIMLVSGILGWTP-VSGRIDSIMWIDT-VTGFMLI 184
           + LDHGV  V   G  +P F  GLLLI +   +LG  P  +GR+D        +TGF+LI
Sbjct: 133 SLLDHGVRFVCTLGVCVPTFVTGLLLIYVFYYLLGIAPDPTGRVDVFAAPPPGITGFLLI 192

Query: 185 DSLLSDEPGAFLSAVHHLILPAIVVGTIPLAVIARMTRSAMLEVLREDYVRTARAKGVSP 244
           D LL  +   + +A   LILPA  +    LA +ARMTR+++L VL  D++RTAR+ G+S 
Sbjct: 193 DFLLVGDLAGWKAAFGQLILPACTMALFVLAPLARMTRASLLAVLGSDFIRTARSVGMSD 252

Query: 245 GRVVMVHALRNALIPVITVIGLQTGVLLAGAILTETIFAWPGVGKWLVDSINRRDYPAVQ 304
            RVV+V+ALRNAL+PV+T+IG+    +L   +L E +F+WPG+G + +D++   DY  VQ
Sbjct: 253 WRVVVVYALRNALLPVLTIIGIVFSTMLGANVLVEKVFSWPGIGSYALDALLASDYAPVQ 312

Query: 305 GGILLISTVVILVNLLVDVLYGVINPRI 332
           G +LLI+ + ++VNL++DVLYG+++PRI
Sbjct: 313 GFVLLIAVIFVMVNLIIDVLYGIVDPRI 340