Pairwise Alignments

Query, 336 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

Subject, 306 a.a., ABC-type dipeptide/oligopeptide/nickel transport systems, permease components from Enterobacter asburiae PDN3

 Score =  258 bits (660), Expect = 1e-73
 Identities = 139/335 (41%), Positives = 207/335 (61%), Gaps = 29/335 (8%)

Query: 1   MISFILRRVVLIIPAFIGVTLLAFALIHLIPGDPILVMAGERGVSPARHAMLMTQLGLDR 60
           M++++ +R++ +IP  + V +L F  +H++PGDP  ++AG    +     ++  QLGLD+
Sbjct: 1   MLNYVCKRLLGLIPTLLIVAVLVFLFVHMLPGDPARLVAGPEADATVID-LVRKQLGLDQ 59

Query: 61  PLWEQYLTYLGKALQGDLGNSIVTRQPVIEEFKTLFPATIELGVFAMVFAVLIGIPAGML 120
           PL+ Q++ Y+   LQGD G S+V+R+PV EE  + F  T  L + +M +AV+ G+ AG++
Sbjct: 60  PLYMQFIHYICNVLQGDFGISMVSRRPVSEEIASRFMPTFWLTIASMCWAVVFGLGAGII 119

Query: 121 AAVKRGTSLDHGVMVVSLTGYSMPIFWWGLLLIMLVSGILGWTPVSGRIDSIMWIDTVTG 180
           AAV R    D   M +++TG S P F  G+LL+ + S  LGW P  G   +  W      
Sbjct: 120 AAVWRNRWPDKLGMALAVTGISFPAFALGMLLMQIFSVELGWLPTVG---ADTW------ 170

Query: 181 FMLIDSLLSDEPGAFLSAVHHLILPAIVVGTIPLAVIARMTRSAMLEVLREDYVRTARAK 240
                               H ILP++ +G    AV+AR TR++ ++VL EDY+RTARAK
Sbjct: 171 -------------------KHYILPSMTLGAAVSAVMARFTRASFVDVLSEDYIRTARAK 211

Query: 241 GVSPGRVVMVHALRNALIPVITVIGLQTGVLLAGAILTETIFAWPGVGKWLVDSINRRDY 300
           GVS   V++ H  RNA+IPV+T++GLQ G LL G+I+ E +F WPG+G+ LVDS+  RDY
Sbjct: 212 GVSEKWVILKHGFRNAMIPVVTMMGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDY 271

Query: 301 PAVQGGILLISTVVILVNLLVDVLYGVINPRIRHR 335
           P +Q  +LL S   IL+NL+VDVLY  INP IR++
Sbjct: 272 PVIQAEVLLFSLEFILINLVVDVLYAAINPAIRYK 306