Pairwise Alignments

Query, 336 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

Subject, 340 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  257 bits (656), Expect = 3e-73
 Identities = 139/324 (42%), Positives = 199/324 (61%), Gaps = 3/324 (0%)

Query: 12  IIPAFIGVTLLAFALIHLIPGDPILVMAGERGVSPARHAMLMTQLGLDRPLWEQYLTYLG 71
           I    +G+ LL F +  L+P DP+  + GE       +  +   LG DRPLW+Q++ YLG
Sbjct: 18  IAVTLLGLLLLTFFIGRLMPADPVRAIVGEDATRET-YEQVYHALGFDRPLWQQFIYYLG 76

Query: 72  KALQGDLGNSIVTRQPVIEEFKTLFPATIELGVFAMVFAVLIGIPAGMLAAVKRGTSLDH 131
               GD G SI T +PVIE+   + PAT+EL  FA++    +GIP G+ AAV +    DH
Sbjct: 77  DVFTGDFGTSIRTGRPVIEDIIRVMPATMELATFAILIGAGLGIPMGVYAAVNKDRWQDH 136

Query: 132 GVMVVSLTGYSMPIFWWGLLLIMLVSGILGWTPVSGRIDS--IMWIDTVTGFMLIDSLLS 189
            V V+SL G+SMPIFW G++ +++    LG     GR+D   I  ++  TGF+LIDSLL+
Sbjct: 137 LVRVLSLFGHSMPIFWTGMIALIVFYAHLGLVGGGGRMDQFYIGLVEERTGFLLIDSLLA 196

Query: 190 DEPGAFLSAVHHLILPAIVVGTIPLAVIARMTRSAMLEVLREDYVRTARAKGVSPGRVVM 249
            +   F SA++HLILPA ++G    A I RMTRS ML+ L ++YV TAR KG+S  + V 
Sbjct: 197 GDMEVFWSAINHLILPAALLGYSSSAYITRMTRSFMLDQLGQEYVTTARVKGLSQRQTVW 256

Query: 250 VHALRNALIPVITVIGLQTGVLLAGAILTETIFAWPGVGKWLVDSINRRDYPAVQGGILL 309
           +HA  N  + ++T+I L  G LL GA+L ET+FAWPG G++L  ++   D  AV   +L+
Sbjct: 257 LHAFGNIRVQLVTIIALAYGSLLEGAVLIETVFAWPGFGQYLTSNLIIGDMNAVMTCVLI 316

Query: 310 ISTVVILVNLLVDVLYGVINPRIR 333
           +  + I +NLL D+LY   +PR R
Sbjct: 317 VGVIFIGLNLLSDILYRFFDPRTR 340