Pairwise Alignments

Query, 862 a.a., CheA Signal Transduction Histidine Kinases (STHK) (NCBI) from Rhodospirillum rubrum S1H

Subject, 1646 a.a., signal transduction histidine kinase CheA/CheY-like receiver from Pseudomonas putida KT2440

 Score =  191 bits (485), Expect = 3e-52
 Identities = 118/361 (32%), Positives = 193/361 (53%), Gaps = 17/361 (4%)

Query: 501  LARRAEEVHGSREMGREIKDTFAVVDRLAQEMQAAIMAVRMLPVSEVFERFPRLVRDIAR 560
            LA+RA+E +   +             R+  ++Q  + A  M+P   +  R  R+VR +A 
Sbjct: 1147 LAQRAQEAYSLLQQQA----------RVNSQLQEGLTATLMVPFERLVPRLQRVVRQVAS 1196

Query: 561  KLGKHIDLVIEGEDTAADKTIVEMLGDPLLHIIRNSLDHGIESPEEREAAGKPPTARVLV 620
            +LGK ++LV+   +   D++++E +  PL H++RN++DHG+ES   R AAGKP    + +
Sbjct: 1197 ELGKQVELVVGNAEGELDRSVLERMVAPLEHMLRNAVDHGLESRAMRLAAGKPEQGTIHL 1256

Query: 621  KAFHDSDQVVIEVSDDGRGIDPVKIRAAAVAKGVIEAERAARLSDQEAVNLVFLPGFSTA 680
               H+   +VIE++DDG G+    +R  A+ +G+++ +  A+LSD E +  +  PGFSTA
Sbjct: 1257 NLLHEGADIVIEMTDDGAGVPLEAVRRKAIKRGLLDPQ--AQLSDHEILQFILRPGFSTA 1314

Query: 681  GQVSDLSGRGVGMDVVVSTMDKANGVVSLSSTPGLGTTVRLSLPLSMAVTRVMMVEAGGG 740
             +++ +SGRG+GMDVV   + +  G +S+ S  G G    + LP ++++ R +MV  G  
Sbjct: 1315 EKITQISGRGLGMDVVHEEVKQLGGSMSIESAQGKGARFLIRLPFTVSINRALMVHLGEE 1374

Query: 741  MLFGIPMDHIAQTVRIPRKAVRRIKQ--SEAFVLRDAIVPLVRLDTLL-GLAPPVWFGDE 797
              + IP++ I   VR+P   +    Q  S  +V       L  L  LL GL  P   G +
Sbjct: 1375 Q-YAIPLNTIEGIVRVPPAELAACYQLDSPRYVYAGHEYELRYLGELLQGLPRPALLG-Q 1432

Query: 798  SQEDAVLVVRVGNALTGLVVDHFREGMDIILKPFDGILAGLPGYSGTALLGDGRVLLVLN 857
            S    VL+V        +  D      +I++K      A + G SG  LLGDGRV+L+L+
Sbjct: 1433 SVPLPVLLVHSKEQSFAIQADSLSPSREIVVKSLGPQFAAVAGLSGATLLGDGRVVLILD 1492

Query: 858  L 858
            L
Sbjct: 1493 L 1493



 Score = 52.8 bits (125), Expect = 2e-10
 Identities = 49/176 (27%), Positives = 77/176 (43%), Gaps = 13/176 (7%)

Query: 5    LLLRFLSEARDLLQTAASGLLALEKTPGDDAALNEVFRSVHTLKGSVGLFDYPAFTKLVH 64
            LL  FL E+ D++++AA+ L   +  P     ++ + R +HTLKG   + +      L H
Sbjct: 890  LLEVFLEESSDIVESAAAALARWQADPRSSVEVDNLMRDLHTLKGVARMVEITPIGDLAH 949

Query: 65   AGEDVLSAVRAGQVALTSELVDLLLDTLDQVGAWVDAIERSGLLPDGAEGL--------S 116
              E +   + AG++  ++ L  LL +  D++   +DA+ R G     A  L        S
Sbjct: 950  ELEFLYELLAAGRLPPSAPLFALLQNCHDRLAHMLDAV-RLGQPLHAATALIDYIRNFSS 1008

Query: 117  LALTTSLRATLPREHGAEPTSAPEPTEAP---VSIDHLALLPEADRLAAFRAALCG 169
             ALT S     P E       A  P  AP   V +D   LL +   LA   + + G
Sbjct: 1009 AALTDSAAGQGPPEAATAEIPAAAPERAPGDMVKVD-AELLDDLGNLAGEHSIIRG 1063



 Score = 37.4 bits (85), Expect = 7e-06
 Identities = 26/75 (34%), Positives = 35/75 (46%)

Query: 9   FLSEARDLLQTAASGLLALEKTPGDDAALNEVFRSVHTLKGSVGLFDYPAFTKLVHAGED 68
           FL EA +LL       L          AL EV R++HTLKGS  +    A  +L    E 
Sbjct: 445 FLDEAGELLPEIERHWLRWRADNQQREALGEVRRALHTLKGSGRMVHAEAVAELAWGAEH 504

Query: 69  VLSAVRAGQVALTSE 83
           +L+ V  G+  L+ E
Sbjct: 505 LLNRVLEGRSVLSPE 519



 Score = 37.0 bits (84), Expect = 1e-05
 Identities = 43/172 (25%), Positives = 65/172 (37%), Gaps = 22/172 (12%)

Query: 5   LLLRFLSEARDLLQTAASGLLALEKTPGDDAALNEVFRSVHTLKGSVGLFDYPAFTKLVH 64
           L+  FL+ A D+L  A + L   ++ PG   AL+ +   + TL  +  L D      +  
Sbjct: 717 LVASFLAHAMDILLDAETLLSRWQQQPGQRDALDNLLDQMTTLGHAAHLADLWQMDDVCE 776

Query: 65  AGEDVLSAVRAGQVALTSELV-------DLLLDTLDQVGAWVDAIER------------S 105
           A  D+  AV  G +   +          + LLD LD+V A  D   R             
Sbjct: 777 ALLDLYGAVEEGSLPADARFFSQAQRAHEALLDMLDEVAAGQDIPPRPELVDRLRNLLDQ 836

Query: 106 GLLPDGAEGLSLALTTSLRATLPREHGAEPTSAPEPTEAPVSIDHLALLPEA 157
            L PD    + +   T L    P    ++    P P   P   + LA  PE+
Sbjct: 837 ALAPDATGLVGIDTVTPLH---PDMDLSDTLGLPRPPLQPQVAEPLAEEPES 885