Pairwise Alignments

Query, 862 a.a., CheA Signal Transduction Histidine Kinases (STHK) (NCBI) from Rhodospirillum rubrum S1H

Subject, 747 a.a., Chemotaxis histidine kinase CheA from Pseudomonas putida KT2440

 Score =  291 bits (745), Expect = 1e-82
 Identities = 161/458 (35%), Positives = 261/458 (56%), Gaps = 25/458 (5%)

Query: 415 GQSGSAAPMLAFLAALFETSETTNETASETASETVGAPPPEGGEALGPVLADQRPA---- 470
           G+ G     +   AA+   +    +  S+  ++   AP P    A  P  A + PA    
Sbjct: 295 GKFGGDVAAVEAPAAVQAQAPAAAKAESQPVAKPAAAPAPS--PASKPAAAPRAPAPAAE 352

Query: 471 -------NRVLKVDQAKIDTLMALIGELVVSKNSLPFLARRAEEVHGSREMGREIKDTFA 523
                     ++VD A++D +M ++GELV+ +N L  L   +    G   M + + +   
Sbjct: 353 KHAASEAETTVRVDTARLDEIMNMVGELVLVRNRLVRLGLNS----GDEAMSKAVSN--- 405

Query: 524 VVDRLAQEMQAAIMAVRMLPVSEVFERFPRLVRDIARKLGKHIDLVIEGEDTAADKTIVE 583
            +D +  ++Q A+M  RM P+ +VF RFPRLVRD+AR+L K I+L + GE+T  DK +VE
Sbjct: 406 -LDVVTADLQTAVMKTRMQPIKKVFGRFPRLVRDLARQLKKEINLELVGEETDLDKNLVE 464

Query: 584 MLGDPLLHIIRNSLDHGIESPEEREAAGKPPTARVLVKAFHDSDQVVIEVSDDGRGIDPV 643
            L DPL+H++RN++DHGIE P+EREA+GK  T RV++ A  + D +++ +SDDG+G+DP 
Sbjct: 465 ALADPLVHLVRNAVDHGIEMPDEREASGKARTGRVVLSAEQEGDHILLSISDDGKGMDPN 524

Query: 644 KIRAAAVAKGVIEAERAARLSDQEAVNLVFLPGFSTAGQVSDLSGRGVGMDVVVSTMDKA 703
            +RA AV KG+++ + A RLS+ +  NL+F PGFST  ++SD+SGRGVGMDVV + + + 
Sbjct: 525 ILRAKAVEKGLMDKDAAERLSESDCYNLIFAPGFSTKTEISDVSGRGVGMDVVKTKISQL 584

Query: 704 NGVVSLSSTPGLGTTVRLSLPLSMAVTRVMMVEAGGGMLFGIPMDHIAQTVRIPRKAVRR 763
           NG +++ S  G G+ + + +PL++A+   +MV   G   F  P+ ++ +   +       
Sbjct: 585 NGSINIFSAKGQGSKIVIKVPLTLAIMPTLMVML-GNQAFAFPLVNVNEIFHLDLSRTNV 643

Query: 764 IKQSEAFVLRDAIVPLVRLDTLLGLAPPVWFGDESQEDAVLVVRVGNALTGLVVDHFREG 823
           +   E  ++RD  +PL  L   L         +E  E  V+++ VG    G VVD     
Sbjct: 644 VDGQEVVIVRDKALPLFYLKRWLVQGQ---VHEEQHEGHVVILSVGTQRIGFVVDQLVGQ 700

Query: 824 MDIILKPFDGILAGLPGYSGTALLGDGRVLLVLNLKEL 861
            ++++KP   +L G PG SG  + GDGR+ L+L++  +
Sbjct: 701 EEVVIKPLGKMLQGTPGMSGATITGDGRIALILDVPSM 738



 Score = 70.5 bits (171), Expect = 4e-16
 Identities = 47/151 (31%), Positives = 72/151 (47%), Gaps = 8/151 (5%)

Query: 5   LLLRFLSEARDLLQTAASGLLALEKTPGDDAALNEVFRSVHTLKGSVGLFDYPAFTKLVH 64
           +L  FL EA ++L+  +  L+ LE  P D   LN +FR  HT+KG  G        +  H
Sbjct: 9   ILQDFLVEAGEILEQLSEQLVELESRPDDADLLNAIFRGFHTVKGGAGFLQLNELVECCH 68

Query: 65  AGEDVLSAVRAGQVALTSELVDLLLDTLDQVGAWVDAIERSGLLPDGAEGLSLALTTSLR 124
             E+V   +R G+  + +EL+D++L+ LD V +    +     +      L  AL     
Sbjct: 69  IAENVFDVLRKGERRVDAELMDVVLEALDTVNSMFGQVRERAEVTPATPALLAAL----- 123

Query: 125 ATLPREHGAEPTSAPEPTEAPVSIDHLALLP 155
           + L     AE  +AP P  APV+ D +A  P
Sbjct: 124 SRLAEPGAAEAVAAPVP--APVA-DVVAAAP 151