Pairwise Alignments

Query, 862 a.a., CheA Signal Transduction Histidine Kinases (STHK) (NCBI) from Rhodospirillum rubrum S1H

Subject, 737 a.a., Chemotaxis protein histidine kinase from Agrobacterium fabrum C58

 Score =  268 bits (686), Expect = 7e-76
 Identities = 157/438 (35%), Positives = 257/438 (58%), Gaps = 15/438 (3%)

Query: 425 AFLAALFETSETTNETASETAS---ETVGAPPPEGGEALGPVLADQRPANRVLKVDQAKI 481
           A++AA  E +  T + A    +   +   A  P   +A     A+   A + ++VD  ++
Sbjct: 289 AYVAATVEAAVATTQIAQSVNAAIEKREAAAAPAAAQANANAAANAS-AGQTIRVDLDRV 347

Query: 482 DTLMALIGELVVSKNSLPFLARRAEEVHGSREMGREIKDTFAVVDRLAQEMQAAIMAVRM 541
           D L+ L+GELV+++  L        +  G+  +   + +    + +L +E+Q ++MA+R 
Sbjct: 348 DRLINLVGELVINQAMLSQSVIE-NDASGTSAVNMGLDE----LQQLTREIQDSVMAIRA 402

Query: 542 LPVSEVFERFPRLVRDIARKLGKHIDLVIEGEDTAADKTIVEMLGDPLLHIIRNSLDHGI 601
            PV  VF+R  R+VR++A  +GK I LV EGE+T  DKT+++ L +PL H+IRN++DHGI
Sbjct: 403 QPVKPVFQRMSRIVREVADMIGKQIRLVTEGENTEVDKTVIDKLAEPLTHMIRNAVDHGI 462

Query: 602 ESPEEREAAGKPPTARVLVKAFHDSDQVVIEVSDDGRGIDPVKIRAAAVAKGVIEAERAA 661
           E+PE+REAAGK P   + + A H S +++IE+ DDG GI+  ++R  A+   +I A+  A
Sbjct: 463 ETPEKREAAGKNPEGTIKLSAKHRSGRILIELQDDGAGINRERVRQKAIDNDLIAAD--A 520

Query: 662 RLSDQEAVNLVFLPGFSTAGQVSDLSGRGVGMDVVVSTMDKANGVVSLSSTPGLGTTVRL 721
            L+D+E  NL+F PGFSTA ++SD+SGRGVGMDVV  ++    G +S+SS PGLG+T  +
Sbjct: 521 NLTDEEIDNLIFAPGFSTADKISDISGRGVGMDVVKRSIQALGGRISISSRPGLGSTFTM 580

Query: 722 SLPLSMAVTRVMMVEAGGGMLFGIPMDHIAQTVRIPRKAVRRIKQSEAFV-LRDAIVPLV 780
           SLPL++AV   M+V   G  L  +P+  I +T++   K +     ++  + +R++  PLV
Sbjct: 581 SLPLTLAVLDGMVVTVAGQTLV-VPLTAIVETLQPEAKNIHSFGSNQRLISIRNSFCPLV 639

Query: 781 RLDTLLGLAPPVWFGDESQEDAVLVVRVGNALTGLVVDHFREGMDIILKPFDGILAGLPG 840
            +  +L   P     D  +  A+LV   G     L+VD  +    +++K  +     +PG
Sbjct: 640 DVGRVLNFRPTQ--ADPVEGVALLVESEGGGQRALMVDAIQGQRQVVIKSLEANYTHVPG 697

Query: 841 YSGTALLGDGRVLLVLNL 858
            +   +LGDGRV L+L++
Sbjct: 698 IAAATILGDGRVALILDV 715



 Score = 55.5 bits (132), Expect = 1e-11
 Identities = 47/188 (25%), Positives = 76/188 (40%), Gaps = 15/188 (7%)

Query: 22  SGLLALEKTPGDDAALNEVFRSVHTLKGSVGLFDYPAFTKLVHAGEDVLSAVRAGQVALT 81
           SGLL L     D   +N VFR+VH++KG  G F         H  E  L  VR+ ++  T
Sbjct: 3   SGLLKLNDGDRDPETVNAVFRAVHSIKGGAGAFGLDDLVAFAHVFETTLDCVRSNKLEPT 62

Query: 82  SELVDLLLDTLDQVGAWVDAIERSGLLPDG-AEGL-----SLALTTSLRATLPREHGAEP 135
            +++ ++L + D +    +A    G + +    GL     +LA   ++ A+ P       
Sbjct: 63  QDVLKVMLRSADVLADLTNAARDGGSVDESRTRGLVKELEALANGEAVPASAP---APVA 119

Query: 136 TSAPEPTEAPVS---IDHLALLPEADRLAAF---RAALCGAPLLSLDYAPAEDCFFSGED 189
             APEP +AP +    D     P     + F      L   P   + + P    +  G +
Sbjct: 120 VKAPEPVKAPAAPKPTDESGFEPIPFSFSDFADETTPLMEVPTFQITFKPHASLYSKGNE 179

Query: 190 PVNLFRQI 197
              L R +
Sbjct: 180 AALLLRDL 187