Pairwise Alignments

Query, 533 a.a., CheW protein (NCBI) from Rhodospirillum rubrum S1H

Subject, 160 a.a., chemotaxis protein CheW from Pseudomonas simiae WCS417

 Score = 94.7 bits (234), Expect = 2e-24
 Identities = 54/155 (34%), Positives = 95/155 (61%), Gaps = 4/155 (2%)

Query: 378 GTTDDEEQFVAFRLMNEEYGVPIDSVQEIVRVPEELTRVPKTPDFIEGVVNLRGVVLPVV 437
           G  D   Q+V F+L NE YG+ +  VQE++R  E +  VP  P ++ G++NLRG V+ V+
Sbjct: 9   GLDDPILQWVTFKLDNETYGINVMRVQEVLRYTE-IAPVPGAPSYVLGIINLRGNVVTVI 67

Query: 438 DQRRRFGLPGMERNDRQRIMVYTIRGVRTGFIVDSVSEVIRIPASLIGPAP-VLSDEQQR 496
           D R+RFGL  +E +D  RI++        G +VDSV+EV+ +  S +  AP V ++E  +
Sbjct: 68  DTRQRFGLGTVEVSDNTRIVIIEADKQVVGIMVDSVAEVVYLRQSEVETAPNVGNEESAK 127

Query: 497 LIRRVANIEKQKRMILLLDVEQLLDGKELAVVGSV 531
            I+ V N  K   +++L+++++++  +E + + S+
Sbjct: 128 FIQGVCN--KNNELLILVELDKMMSEEEWSELESI 160



 Score = 79.7 bits (195), Expect = 7e-20
 Identities = 41/131 (31%), Positives = 76/131 (58%), Gaps = 1/131 (0%)

Query: 34  QFVIFHVDNDLFAVPLSEVQEIIRMPDVVCVPLSPAALEGLANLRGSVLPVIRLRHVFGM 93
           Q+V F +DN+ + + +  VQE++R  ++  VP +P+ + G+ NLRG+V+ VI  R  FG+
Sbjct: 16  QWVTFKLDNETYGINVMRVQEVLRYTEIAPVPGAPSYVLGIINLRGNVVTVIDTRQRFGL 75

Query: 94  APVVHDDATRVVVLDQGRP-VGLVVDRVANVVSVEADHIEPSGAIGGTVDTDLLTGMIKG 152
             V   D TR+V+++  +  VG++VD VA VV +    +E +  +G       + G+   
Sbjct: 76  GTVEVSDNTRIVIIEADKQVVGIMVDSVAEVVYLRQSEVETAPNVGNEESAKFIQGVCNK 135

Query: 153 DGDRAMVMILD 163
           + +  +++ LD
Sbjct: 136 NNELLILVELD 146



 Score = 71.2 bits (173), Expect = 2e-17
 Identities = 45/163 (27%), Positives = 90/163 (55%), Gaps = 20/163 (12%)

Query: 197 AATDGDDES--QLVSFEVAGQEYALPIERVQEIVQIPGLITDVPNTPAHVLGVMTLRNRL 254
           A+  G D+   Q V+F++  + Y + + RVQE+++    I  VP  P++VLG++ LR  +
Sbjct: 5   ASAQGLDDPILQWVTFKLDNETYGINVMRVQEVLRYTE-IAPVPGAPSYVLGIINLRGNV 63

Query: 255 LPLVGLREMFGLPTLALTETNKIVVVSLEGGAGGSGRSVGVVMDSVKEVLRVGHALIDPM 314
           + ++  R+ FGL T+ +++  +IV++  +       + VG+++DSV EV+ +  + ++  
Sbjct: 64  VTVIDTRQRFGLGTVEVSDNTRIVIIEAD------KQVVGIMVDSVAEVVYLRQSEVETA 117

Query: 315 PALLARTGNLGEIEAICRLQG----GNRLVSILSADAMFNSDE 353
           P       N+G  E+   +QG     N L+ ++  D M + +E
Sbjct: 118 P-------NVGNEESAKFIQGVCNKNNELLILVELDKMMSEEE 153